Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1346
         (323 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3192|AAF56027.3| 1346|Drosophila melanogaster CG31158-P...    28   3.2  
AE014297-3191|AAO41590.1| 1480|Drosophila melanogaster CG31158-P...    28   3.2  

>AE014297-3192|AAF56027.3| 1346|Drosophila melanogaster CG31158-PA,
           isoform A protein.
          Length = 1346

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +2

Query: 29  TEAHRHLQRKCATHLEIKF*DLSIVTTTAPPFGLTRGPTTS 151
           T  H H +   A+  +IK  + SI T+T    GLT  PT S
Sbjct: 136 THTHSHSRNSSASSTKIKVVETSITTSTTNVVGLT-SPTGS 175


>AE014297-3191|AAO41590.1| 1480|Drosophila melanogaster CG31158-PB,
           isoform B protein.
          Length = 1480

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +2

Query: 29  TEAHRHLQRKCATHLEIKF*DLSIVTTTAPPFGLTRGPTTS 151
           T  H H +   A+  +IK  + SI T+T    GLT  PT S
Sbjct: 136 THTHSHSRNSSASSTKIKVVETSITTSTTNVVGLT-SPTGS 175


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,652,667
Number of Sequences: 53049
Number of extensions: 339695
Number of successful extensions: 800
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)