Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1343
(632 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC005295-1|AAH05295.1| 400|Homo sapiens poly(A) binding protein... 71 3e-12
AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding p... 71 3e-12
BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein... 68 3e-11
BX640951-1|CAE45975.1| 370|Homo sapiens hypothetical protein pr... 31 2.6
BC100790-1|AAI00791.1| 284|Homo sapiens ADAMTSL1 protein protein. 31 2.6
BC100788-1|AAI00789.1| 467|Homo sapiens ADAMTSL1 protein protein. 31 2.6
AL591423-1|CAM13086.1| 1263|Homo sapiens ADAMTS-like 1 protein. 31 2.6
AL353895-2|CAM20931.1| 1263|Homo sapiens ADAMTS-like 1 protein. 31 2.6
AL158150-6|CAM14352.1| 1263|Homo sapiens ADAMTS-like 1 protein. 31 2.6
AL158150-3|CAO03592.1| 463|Homo sapiens ADAMTS-like 1 protein. 31 2.6
AL158150-1|CAO03591.1| 258|Homo sapiens ADAMTS-like 1 protein. 31 2.6
AK092602-1|BAC03925.1| 262|Homo sapiens protein ( Homo sapiens ... 31 2.6
M25897-1|AAA60066.1| 101|Homo sapiens platelet factor 4 protein. 31 4.5
CR407677-1|CAG28605.1| 101|Homo sapiens PF4 protein. 31 4.5
BC112093-1|AAI12094.1| 101|Homo sapiens platelet factor 4 (chem... 31 4.5
BC093965-1|AAH93965.1| 101|Homo sapiens platelet factor 4 (chem... 31 4.5
AF349466-3|AAK29643.1| 101|Homo sapiens platelet factor 4 protein. 31 4.5
AC097709-1|AAY41003.1| 101|Homo sapiens unknown protein. 31 4.5
M26167-1|AAA60067.1| 104|Homo sapiens platelet factor 4 protein. 30 5.9
BC130657-1|AAI30658.1| 104|Homo sapiens platelet factor 4 varia... 30 5.9
BC130653-1|AAI30654.1| 104|Homo sapiens platelet factor 4 varia... 30 5.9
>BC005295-1|AAH05295.1| 400|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 400
Score = 70.9 bits (166), Expect = 3e-12
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Frame = +2
Query: 77 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 250
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 90 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 149
Query: 251 SVAQPEESVFRECLLERCSVE---ENKIISGLETSEENMRGFAMFLAEIYTQLE----DS 409
P+ FR+ LL+RC E +++ G E + + F +FL E+Y LE +
Sbjct: 150 LTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNG 209
Query: 410 QGGRIKTLGESLCKVFLHLLDTDKESNIKAVCQLLKLSGLALD 538
Q R L L ++ L + N+ +LLKL+G L+
Sbjct: 210 QVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLE 252
>AF013758-1|AAC39697.2| 479|Homo sapiens polyadenylate binding
protein-interacting protein-1 protein.
Length = 479
Score = 70.9 bits (166), Expect = 3e-12
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Frame = +2
Query: 77 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 250
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 169 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 228
Query: 251 SVAQPEESVFRECLLERCSVE---ENKIISGLETSEENMRGFAMFLAEIYTQLE----DS 409
P+ FR+ LL+RC E +++ G E + + F +FL E+Y LE +
Sbjct: 229 LTISPQSGNFRQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNG 288
Query: 410 QGGRIKTLGESLCKVFLHLLDTDKESNIKAVCQLLKLSGLALD 538
Q R L L ++ L + N+ +LLKL+G L+
Sbjct: 289 QVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLE 331
>BC015937-1|AAH15937.1| 479|Homo sapiens poly(A) binding protein
interacting protein 1 protein.
Length = 479
Score = 67.7 bits (158), Expect = 3e-11
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Frame = +2
Query: 77 ITFDPGKFDTLCGPLVDSFASTLNDESYTRPLVDAIVNQSIGEANFRYNGARLCS--MYD 250
+T PG F+T ++ + + + LV+ I Q+ NF Y GARLC+ +
Sbjct: 169 LTEQPGSFETEIEQFAETLNGCVTTDDALQELVELIYQQATSIPNFSYMGARLCNYLSHH 228
Query: 251 SVAQPEESVFRECLLERCSVE---ENKIISGLETSEENMRGFAMFLAEIYTQLE----DS 409
P+ F + LL+RC E +++ G E + + F +FL E+Y LE +
Sbjct: 229 LTISPQSGNFCQLLLQRCRTEYEVKDQAAKGDEVTRKRFHAFVLFLGELYLNLEIKGTNG 288
Query: 410 QGGRIKTLGESLCKVFLHLLDTDKESNIKAVCQLLKLSGLALD 538
Q R L L ++ L + N+ +LLKL+G L+
Sbjct: 289 QVTRADILQVGLRELLNALFSNPMDDNLICAVKLLKLTGSVLE 331
>BX640951-1|CAE45975.1| 370|Homo sapiens hypothetical protein
protein.
Length = 370
Score = 31.5 bits (68), Expect = 2.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 302 SARAGTRGIQTPRVAPLNRTLNTNELHCTG 213
SA G RG+Q PR+ L + N HC G
Sbjct: 261 SASCGNRGVQQPRLRCLLNSTEVNPAHCAG 290
>BC100790-1|AAI00791.1| 284|Homo sapiens ADAMTSL1 protein protein.
Length = 284
Score = 31.5 bits (68), Expect = 2.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 302 SARAGTRGIQTPRVAPLNRTLNTNELHCTG 213
SA G RG+Q PR+ L + N HC G
Sbjct: 22 SASCGNRGVQQPRLRCLLNSTEVNPAHCAG 51
>BC100788-1|AAI00789.1| 467|Homo sapiens ADAMTSL1 protein protein.
Length = 467
Score = 31.5 bits (68), Expect = 2.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 302 SARAGTRGIQTPRVAPLNRTLNTNELHCTG 213
SA G RG+Q PR+ L + N HC G
Sbjct: 205 SASCGNRGVQQPRLRCLLNSTEVNPAHCAG 234
>AL591423-1|CAM13086.1| 1263|Homo sapiens ADAMTS-like 1 protein.
Length = 1263
Score = 31.5 bits (68), Expect = 2.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 302 SARAGTRGIQTPRVAPLNRTLNTNELHCTG 213
SA G RG+Q PR+ L + N HC G
Sbjct: 1001 SASCGNRGVQQPRLRCLLNSTEVNPAHCAG 1030
>AL353895-2|CAM20931.1| 1263|Homo sapiens ADAMTS-like 1 protein.
Length = 1263
Score = 31.5 bits (68), Expect = 2.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 302 SARAGTRGIQTPRVAPLNRTLNTNELHCTG 213
SA G RG+Q PR+ L + N HC G
Sbjct: 1001 SASCGNRGVQQPRLRCLLNSTEVNPAHCAG 1030
>AL158150-6|CAM14352.1| 1263|Homo sapiens ADAMTS-like 1 protein.
Length = 1263
Score = 31.5 bits (68), Expect = 2.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 302 SARAGTRGIQTPRVAPLNRTLNTNELHCTG 213
SA G RG+Q PR+ L + N HC G
Sbjct: 1001 SASCGNRGVQQPRLRCLLNSTEVNPAHCAG 1030
>AL158150-3|CAO03592.1| 463|Homo sapiens ADAMTS-like 1 protein.
Length = 463
Score = 31.5 bits (68), Expect = 2.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 302 SARAGTRGIQTPRVAPLNRTLNTNELHCTG 213
SA G RG+Q PR+ L + N HC G
Sbjct: 201 SASCGNRGVQQPRLRCLLNSTEVNPAHCAG 230
>AL158150-1|CAO03591.1| 258|Homo sapiens ADAMTS-like 1 protein.
Length = 258
Score = 31.5 bits (68), Expect = 2.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 302 SARAGTRGIQTPRVAPLNRTLNTNELHCTG 213
SA G RG+Q PR+ L + N HC G
Sbjct: 201 SASCGNRGVQQPRLRCLLNSTEVNPAHCAG 230
>AK092602-1|BAC03925.1| 262|Homo sapiens protein ( Homo sapiens
cDNA FLJ35283 fis, clone PROST2007528. ).
Length = 262
Score = 31.5 bits (68), Expect = 2.6
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1
Query: 302 SARAGTRGIQTPRVAPLNRTLNTNELHCTG 213
SA G RG+Q PR+ L + N HC G
Sbjct: 205 SASCGNRGVQQPRLRCLLNSTEVNPAHCAG 234
>M25897-1|AAA60066.1| 101|Homo sapiens platelet factor 4 protein.
Length = 101
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 216 GTMELVCVQCTIQWRNPRSLYSASACSSAVPLRKTRLSAAWKLQRRICVDLLCSLPRFIL 395
G ++ +CV+ T Q R PR + S + +L A K R+IC+DL L + I+
Sbjct: 37 GDLQCLCVKTTSQVR-PRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKII 95
>CR407677-1|CAG28605.1| 101|Homo sapiens PF4 protein.
Length = 101
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 216 GTMELVCVQCTIQWRNPRSLYSASACSSAVPLRKTRLSAAWKLQRRICVDLLCSLPRFIL 395
G ++ +CV+ T Q R PR + S + +L A K R+IC+DL L + I+
Sbjct: 37 GDLQCLCVKTTSQVR-PRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKII 95
>BC112093-1|AAI12094.1| 101|Homo sapiens platelet factor 4
(chemokine (C-X-C motif) ligand 4) protein.
Length = 101
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 216 GTMELVCVQCTIQWRNPRSLYSASACSSAVPLRKTRLSAAWKLQRRICVDLLCSLPRFIL 395
G ++ +CV+ T Q R PR + S + +L A K R+IC+DL L + I+
Sbjct: 37 GDLQCLCVKTTSQVR-PRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKII 95
>BC093965-1|AAH93965.1| 101|Homo sapiens platelet factor 4
(chemokine (C-X-C motif) ligand 4) protein.
Length = 101
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 216 GTMELVCVQCTIQWRNPRSLYSASACSSAVPLRKTRLSAAWKLQRRICVDLLCSLPRFIL 395
G ++ +CV+ T Q R PR + S + +L A K R+IC+DL L + I+
Sbjct: 37 GDLQCLCVKTTSQVR-PRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKII 95
>AF349466-3|AAK29643.1| 101|Homo sapiens platelet factor 4 protein.
Length = 101
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 216 GTMELVCVQCTIQWRNPRSLYSASACSSAVPLRKTRLSAAWKLQRRICVDLLCSLPRFIL 395
G ++ +CV+ T Q R PR + S + +L A K R+IC+DL L + I+
Sbjct: 37 GDLQCLCVKTTSQVR-PRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKII 95
>AC097709-1|AAY41003.1| 101|Homo sapiens unknown protein.
Length = 101
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 216 GTMELVCVQCTIQWRNPRSLYSASACSSAVPLRKTRLSAAWKLQRRICVDLLCSLPRFIL 395
G ++ +CV+ T Q R PR + S + +L A K R+IC+DL L + I+
Sbjct: 37 GDLQCLCVKTTSQVR-PRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQAPLYKKII 95
>M26167-1|AAA60067.1| 104|Homo sapiens platelet factor 4 protein.
Length = 104
Score = 30.3 bits (65), Expect = 5.9
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 216 GTMELVCVQCTIQWRNPRSLYSASACSSAVPLRKTRLSAAWKLQRRICVDLLCSLPRFIL 395
G ++ +CV+ T Q R PR + S + +L A K R+IC+DL L + I+
Sbjct: 40 GDLQCLCVKTTSQVR-PRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQALLYKKII 98
>BC130657-1|AAI30658.1| 104|Homo sapiens platelet factor 4 variant
1 protein.
Length = 104
Score = 30.3 bits (65), Expect = 5.9
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 216 GTMELVCVQCTIQWRNPRSLYSASACSSAVPLRKTRLSAAWKLQRRICVDLLCSLPRFIL 395
G ++ +CV+ T Q R PR + S + +L A K R+IC+DL L + I+
Sbjct: 40 GDLQCLCVKTTSQVR-PRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQALLYKKII 98
>BC130653-1|AAI30654.1| 104|Homo sapiens platelet factor 4 variant
1 protein.
Length = 104
Score = 30.3 bits (65), Expect = 5.9
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +3
Query: 216 GTMELVCVQCTIQWRNPRSLYSASACSSAVPLRKTRLSAAWKLQRRICVDLLCSLPRFIL 395
G ++ +CV+ T Q R PR + S + +L A K R+IC+DL L + I+
Sbjct: 40 GDLQCLCVKTTSQVR-PRHITSLEVIKAGPHCPTAQLIATLKNGRKICLDLQALLYKKII 98
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,582,123
Number of Sequences: 237096
Number of extensions: 1894248
Number of successful extensions: 4366
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 4209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4361
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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