Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1343
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical ... 29 2.8
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 29 2.8
Z92789-8|CAB07222.3| 495|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68336-9|CAA92741.3| 495|Caenorhabditis elegans Hypothetical pr... 29 3.7
U80027-10|AAC48118.3| 295|Caenorhabditis elegans Serpentine rec... 28 4.8
AL137227-11|CAB70241.2| 328|Caenorhabditis elegans Hypothetical... 28 4.8
AL033536-11|CAC15866.1| 328|Caenorhabditis elegans Hypothetical... 28 4.8
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 28 4.8
Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z73428-2|CAA97806.2| 572|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z36753-5|CAA85334.1| 173|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF077529-1|AAC26253.1| 690|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z29115-6|CAA82365.2| 1374|Caenorhabditis elegans Hypothetical protein
C38C10.5b protein.
Length = 1374
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 185 QWHPPRVWYSFHH*VLKQMNPPR 117
QW+PP V S+HH + Q PP+
Sbjct: 1352 QWNPPSVGQSYHHPLHHQQYPPQ 1374
>Z29115-5|CAA82366.2| 1368|Caenorhabditis elegans Hypothetical protein
C38C10.5a protein.
Length = 1368
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 185 QWHPPRVWYSFHH*VLKQMNPPR 117
QW+PP V S+HH + Q PP+
Sbjct: 1346 QWNPPSVGQSYHHPLHHQQYPPQ 1368
>Z19153-7|CAA79550.2| 1374|Caenorhabditis elegans Hypothetical protein
C38C10.5b protein.
Length = 1374
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 185 QWHPPRVWYSFHH*VLKQMNPPR 117
QW+PP V S+HH + Q PP+
Sbjct: 1352 QWNPPSVGQSYHHPLHHQQYPPQ 1374
>Z19153-6|CAA79551.2| 1368|Caenorhabditis elegans Hypothetical protein
C38C10.5a protein.
Length = 1368
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 185 QWHPPRVWYSFHH*VLKQMNPPR 117
QW+PP V S+HH + Q PP+
Sbjct: 1346 QWNPPSVGQSYHHPLHHQQYPPQ 1368
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 224 GARLCSMYDSVAQPEESVFRECLLERCSVEENKIISGL 337
GA + +YD PEE + R+C C E K++ L
Sbjct: 295 GASIGMVYDRKTTPEEVIQRQCKKFGCETEREKMLHKL 332
>AL031632-4|CAA21007.1| 451|Caenorhabditis elegans Hypothetical
protein Y32B12B.5 protein.
Length = 451
Score = 29.1 bits (62), Expect = 2.8
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +3
Query: 105 PCVVPWWIHLLQH 143
PC++P W+H++QH
Sbjct: 124 PCIMPLWLHVIQH 136
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 224 GARLCSMYDSVAQPEESVFRECLLERCSVEENKIISGL 337
GA + +YD PEE + R+C C E K++ L
Sbjct: 295 GASIGMVYDRKTTPEEVIQRQCKKFGCETEREKMLHKL 332
>Z92789-8|CAB07222.3| 495|Caenorhabditis elegans Hypothetical
protein H02I12.8 protein.
Length = 495
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 193 VNRRS*FPVQWSSFVFNVRFSGATRGVCI 279
+++R+ P+ W+SF++N+ G T C+
Sbjct: 212 ISKRTNNPLMWNSFIYNLTEDGRTHEKCL 240
>Z68336-9|CAA92741.3| 495|Caenorhabditis elegans Hypothetical
protein H02I12.8 protein.
Length = 495
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 193 VNRRS*FPVQWSSFVFNVRFSGATRGVCI 279
+++R+ P+ W+SF++N+ G T C+
Sbjct: 212 ISKRTNNPLMWNSFIYNLTEDGRTHEKCL 240
>U80027-10|AAC48118.3| 295|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 5 protein.
Length = 295
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = -2
Query: 451 FAETFTES-LYSSSLTILKLSI--NLGKEHSKSTHILL 347
FA TF S L S+ L L S+ N G+EHSK HI L
Sbjct: 187 FALTFVLSGLLSTRLMFLNKSLGQNAGEEHSKINHIAL 224
>AL137227-11|CAB70241.2| 328|Caenorhabditis elegans Hypothetical
protein F58D5.8 protein.
Length = 328
Score = 28.3 bits (60), Expect = 4.8
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = -3
Query: 366 NPRIFSSEVSKPLIILFSSTEQRSSRHSRNTDSSG-CATESYIEHKRAPLYR-KLASPID 193
+P+ S V + S RSSR S+++DSS + SYI+ + P + K + D
Sbjct: 4 SPQTPGSSVLSSSVSSVGSRSSRSSRSSKHSDSSSRISNFSYIQDPKKPNFAYKASDDED 63
Query: 192 *LTMASTKGLV*LSSLSV 139
L S K L S +++
Sbjct: 64 DLEKKSRKKLRTFSPITI 81
>AL033536-11|CAC15866.1| 328|Caenorhabditis elegans Hypothetical
protein F58D5.8 protein.
Length = 328
Score = 28.3 bits (60), Expect = 4.8
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = -3
Query: 366 NPRIFSSEVSKPLIILFSSTEQRSSRHSRNTDSSG-CATESYIEHKRAPLYR-KLASPID 193
+P+ S V + S RSSR S+++DSS + SYI+ + P + K + D
Sbjct: 4 SPQTPGSSVLSSSVSSVGSRSSRSSRSSKHSDSSSRISNFSYIQDPKKPNFAYKASDDED 63
Query: 192 *LTMASTKGLV*LSSLSV 139
L S K L S +++
Sbjct: 64 DLEKKSRKKLRTFSPITI 81
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -2
Query: 610 AHERQRPAPPEPLE-RRVHPRRAVRVEGQTRQLEQLT 503
++E PAPP+P+E +V P + E +Q+ Q T
Sbjct: 3223 SYEPPEPAPPQPVEIPKVEPTPEISFESLAQQMAQKT 3259
>Z74041-9|CAA98523.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 239 SMYDSVAQPEESVFRECLLERCSVEE 316
S+Y S + P+ES+ EC LE+C++ E
Sbjct: 272 SLYISYSNPDESLKSEC-LEKCTMSE 296
>Z74035-5|CAA98485.2| 801|Caenorhabditis elegans Hypothetical
protein F47G9.3 protein.
Length = 801
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 239 SMYDSVAQPEESVFRECLLERCSVEE 316
S+Y S + P+ES+ EC LE+C++ E
Sbjct: 272 SLYISYSNPDESLKSEC-LEKCTMSE 296
>Z73428-2|CAA97806.2| 572|Caenorhabditis elegans Hypothetical
protein M142.2 protein.
Length = 572
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 5 YSLEEAENMDLRENIANLITVMCEITFDPGKFDTLCGP 118
+++E E +D R +L MC+ F PG + +CGP
Sbjct: 200 FTVESFEQLD-RALADSLTWSMCKTEFRPGTPEIICGP 236
>Z36753-5|CAA85334.1| 173|Caenorhabditis elegans Hypothetical
protein T09A5.6 protein.
Length = 173
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 296 ERCSVEENKIIS---GLETSEENMRGFAMFLAEIYTQLEDSQGGRIKTLGESL 445
ER E++KI+ LE +EN R + T+ +D+ GRI TL L
Sbjct: 35 ERRKQEDDKILQLEKKLEEFQENARFIGDLASNFQTKYQDALNGRIYTLVRGL 87
>AF077529-1|AAC26253.1| 690|Caenorhabditis elegans Hypothetical
protein C09E8.3 protein.
Length = 690
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = -3
Query: 504 QTALMFDSLSVSNRCRKTLQRLSPRVFILPP*LSSS*V*ISARNIANPRIFS 349
+TALM +V++ +KTL+ +SPR+ + P S N+ +P +FS
Sbjct: 296 KTALMLGGQNVTDFDQKTLKMVSPRMMSIVPEQEDE----SLFNLLSPSLFS 343
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,780,606
Number of Sequences: 27780
Number of extensions: 292257
Number of successful extensions: 914
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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