Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1342
(780 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 43 1e-05
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 40 7e-05
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 38 3e-04
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 38 3e-04
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 38 5e-04
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 38 5e-04
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 33 0.013
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 29 0.21
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 29 0.21
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 26 1.1
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 26 1.1
AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein. 25 3.5
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh... 23 8.0
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 42.7 bits (96), Expect = 1e-05
Identities = 21/60 (35%), Positives = 30/60 (50%)
Frame = +2
Query: 596 VILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIA 775
V+ AGDLN H W S T G + LVD L +++ T + N RP ++D+A
Sbjct: 116 VVFAGDLNAWHTAWGSCRTNAKGEAVVQLVDSLGLEVLNTGTAPTFLGNGVARPSVVDVA 175
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 40.3 bits (90), Expect = 7e-05
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +2
Query: 512 IVIASVYLPPDKIVLSSD--VEALLGMGSS---VILAGDLNCKHIRWNSHTTTPNGRRLD 676
+V S Y PP + + +EA+ G S V++AGD N +H W S T G L
Sbjct: 96 VVFISCYAPPSLNLAEFERFLEAIELEGFSHPQVVVAGDFNARHEEWGSPRTCDRGEELH 155
Query: 677 ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIA 775
+V+ L ++ + N P I+D+A
Sbjct: 156 GMVEQLGLIVINQGREYTFVGNGVALPSIVDVA 188
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 37.9 bits (84), Expect = 3e-04
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +2
Query: 566 VEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNI 745
++ L+ V+LAGD N H W S T P G L LV+ L +++ T +
Sbjct: 106 IDILIRGHPRVLLAGDFNAWHTAWGSERTKPKGIALLQLVNGLGLEVLNIGTSHTFRGCG 165
Query: 746 AHRPDILDIA 775
+ RP +D+A
Sbjct: 166 SARPSRIDVA 175
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 37.9 bits (84), Expect = 3e-04
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +2
Query: 590 SSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDL 694
S V+LAGD N H+ W S T P G L L D+L
Sbjct: 115 SRVLLAGDFNAMHLDWGSSRTCPKGLELLQLADNL 149
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 37.5 bits (83), Expect = 5e-04
Identities = 28/94 (29%), Positives = 38/94 (40%), Gaps = 5/94 (5%)
Frame = +2
Query: 506 APIVIASVYLPPDKIV-----LSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRR 670
A I SVY PP L VE S V++AGD N H W S G
Sbjct: 83 AGIDFISVYAPPSLSPQEYERLLEAVELEASSHSHVVIAGDFNAWHTEWGSRRNNLRGEE 142
Query: 671 LDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDI 772
L +V+ L I+ + + A RP ++D+
Sbjct: 143 LLQMVEVLGLSILNNGSAPTFIGRGAARPSVIDV 176
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 37.5 bits (83), Expect = 5e-04
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 590 SSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILD 769
S V++AGD N H+ W S + G L + + L ++ T + + N A I+D
Sbjct: 117 SQVVIAGDFNAWHVEWGSERNSEKGEELLSAIQQLDLVVLNQGTTSTFDGNGAATASIVD 176
Query: 770 IA 775
+A
Sbjct: 177 VA 178
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 32.7 bits (71), Expect = 0.013
Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Frame = +2
Query: 506 APIVIASVYLPPDKIVLSSDVEALLGM-------GSSVILAGDLNCKHIRWNSHTTTPNG 664
A I SVY PP + + + E LLG S V++AGD N H W S G
Sbjct: 146 AGITFISVYAPPS--LSAHEFERLLGAIELEAASHSRVVVAGDFNAWHEEWGSGRNGQRG 203
Query: 665 RRLDALVDDLAFDIV 709
L V+ L I+
Sbjct: 204 IELLQTVETLGLSIL 218
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 28.7 bits (61), Expect = 0.21
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +2
Query: 566 VEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIV 709
VE + +V+L GD N H W S T G L V+ L ++
Sbjct: 106 VEIEVSAHPNVVLGGDFNAWHEAWGSARTKRKGEELLNTVEQLGLIVL 153
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 28.7 bits (61), Expect = 0.21
Identities = 11/40 (27%), Positives = 18/40 (45%)
Frame = +2
Query: 590 SSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIV 709
S V++ GD N H W S + G L L+ + ++
Sbjct: 136 SQVVIDGDFNAWHTEWGSARNSQRGEDLLQLIQSVQLQVI 175
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 26.2 bits (55), Expect = 1.1
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Frame = +2
Query: 512 IVIASVYLPPD--KIVLSSDVEALLGMGSS---VILAGDLNCKHIRWNSHTTTPNGRRL 673
I S Y PP + + VEA+ S V++AGD N H W S + G L
Sbjct: 142 ITFLSCYAPPSLSREGFAEFVEAIELEAQSHPQVVVAGDFNAWHEEWGSRRSNERGEVL 200
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 26.2 bits (55), Expect = 1.1
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 6/93 (6%)
Frame = +2
Query: 512 IVIASVYLPP----DKI-VLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLD 676
+ S Y PP ++ V+ ++ A L +++AGD N + W S T G D
Sbjct: 80 VFFCSCYAPPSWELERFHVMLDNLVAELDGHRPLVIAGDFNAWAVEWGSKRTNSRG---D 136
Query: 677 ALVDDLA-FDIVAPLTPTHYPLNIAHRPDILDI 772
A+++ A + T N R I+DI
Sbjct: 137 AVLESFARLGVTLGNAGTTPTFNRNKRTSIVDI 169
>AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein.
Length = 461
Score = 24.6 bits (51), Expect = 3.5
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +3
Query: 231 LTLTVSQINVIRFLTFCVTIKLISF*CRRPYLSPRAVTLKSRTITWSGT 377
+ L+ + V++ L+ + I++ Y R L R I WSGT
Sbjct: 248 IVLSTGPVTVLQMLSIVSAMGSIAWCMASHYRCVRFARLDKRHIPWSGT 296
>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative
cell-adhesion protein protein.
Length = 1881
Score = 23.4 bits (48), Expect = 8.0
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 446 DPPALANIEASVCRISLTGHAPIVIASVY 532
+PP A +E +V + +AP+ + S Y
Sbjct: 718 EPPLTAQVEVTVYVQDVNDYAPVFLESQY 746
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,636
Number of Sequences: 2352
Number of extensions: 14798
Number of successful extensions: 37
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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