Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1342
(780 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 91 2e-18
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 87 2e-17
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 86 6e-17
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 79 9e-15
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 77 4e-14
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 75 1e-13
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 75 1e-13
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 75 1e-13
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 75 1e-13
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 70 4e-12
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 66 7e-11
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 65 9e-11
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 64 2e-10
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 62 6e-10
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 62 1e-09
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 62 1e-09
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 62 1e-09
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 56 7e-08
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 46 4e-05
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 46 8e-05
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 40 0.004
BT011177-1|AAR88538.1| 85|Drosophila melanogaster RH16194p pro... 32 0.77
AE014296-2334|AAO41253.1| 653|Drosophila melanogaster CG17364-P... 30 3.1
AE014296-2333|AAF49781.3| 804|Drosophila melanogaster CG17364-P... 30 3.1
AY069120-1|AAL39265.1| 224|Drosophila melanogaster GH13185p pro... 29 5.4
AE014134-460|AAF51216.1| 224|Drosophila melanogaster CG9960-PA,... 29 5.4
M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adeny... 29 7.2
AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA... 29 7.2
AY071121-1|AAL48743.1| 119|Drosophila melanogaster RE17113p pro... 29 9.5
AE014296-1399|AAN12016.1| 119|Drosophila melanogaster CG13679-P... 29 9.5
AE014296-1398|AAF50465.1| 145|Drosophila melanogaster CG13679-P... 29 9.5
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 90.6 bits (215), Expect = 2e-18
Identities = 58/190 (30%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Frame = +2
Query: 212 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLS- 388
++ IG +NA GL +++ FL DH ID+ L ET ++ +R + Y M S
Sbjct: 5 TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRI-YLPGYLMYHAHHPSG 63
Query: 389 -ARGGGTVIYYRRALHCVPLDPPALANIEASVCRISL-TGHAPIVIASVYLPPDKIVLSS 562
+RGG VI R H PL P ++ + + R+ L T + +A+VYLPP + +
Sbjct: 64 NSRGGSAVIIKSRLCHS-PLTP--ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVD 120
Query: 563 DVEALLG-MGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPL 739
D +++ +G+ I GD N KH W + + P G+ L ++ + ++A PT Y
Sbjct: 121 DFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSY 180
Query: 740 NIAHRPDILD 769
N P LD
Sbjct: 181 NPLLTPSALD 190
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 87.4 bits (207), Expect = 2e-17
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 4/181 (2%)
Frame = +2
Query: 212 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLS- 388
++ IG +NA GL +++ FL DH ID+ L ET ++ +R + Y M S
Sbjct: 5 TLKIGLWNARGLTRGSEELRIFLSDHDIDVMLTTETHMRVGQRI-YLPGYLMYHAHHPSG 63
Query: 389 -ARGGGTVIYYRRALHCVPLDPPALANIEASVCRISL-TGHAPIVIASVYLPPDKIVLSS 562
+RGG VI R H PL P ++ + + R+ L T + +A+VYLPP + +
Sbjct: 64 NSRGGSAVIIKSRLCHS-PLTP--ISTNDRQIARVHLQTSVGTVTVAAVYLPPAERWIVD 120
Query: 563 DVEALLG-MGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYPL 739
D +++ +G+ I GD N KH W + + P G+ L ++ + ++A PT Y
Sbjct: 121 DFKSMFAALGNKFIAGGDYNAKHAWWGNPRSCPRGKMLQEVIAHGQYQVLATGEPTFYSY 180
Query: 740 N 742
N
Sbjct: 181 N 181
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 85.8 bits (203), Expect = 6e-17
Identities = 53/193 (27%), Positives = 99/193 (51%), Gaps = 4/193 (2%)
Frame = +2
Query: 212 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLSA 391
++ I +NA G++ ++ +++ FL + ID+ L+ ET L ++ + +I +Y+ +
Sbjct: 3 TLRIATWNANGVSQRKLELAQFLHEKHIDVMLLSETHLT-SKYNFQIRDYHFYGTNHPDG 61
Query: 392 RG-GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD- 565
+ GGT I R + A +++A+ I L + + +A+VY PP VL +
Sbjct: 62 KAHGGTAILIRNRMKHHFYKEFAENHLQATSINIQLDDNTLLTLAAVYCPPRFTVLEAQF 121
Query: 566 VEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLA--FDIVAPLTPTHYPL 739
++ +G I AGD N KH W S P G++L + D V+P +PT++P
Sbjct: 122 LDFFQALGPHFIAAGDYNAKHTHWGSRLVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPS 181
Query: 740 NIAHRPDILDIAL 778
++ PD++D A+
Sbjct: 182 DLNKLPDLIDFAV 194
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 78.6 bits (185), Expect = 9e-15
Identities = 59/194 (30%), Positives = 89/194 (45%), Gaps = 3/194 (1%)
Frame = +2
Query: 206 PLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY-NMVRNDR 382
PL + + +NA G++ + +V F+R H+ID+ L+ ET K A PK+ + ND
Sbjct: 3 PLRILV--WNADGVSTKLPEVECFVRRHEIDVLLLSETHCKGAET-PKLFGFVAYTANDP 59
Query: 383 LSARG-GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS 559
GG I + +L PL P A A ++ + I T PI +VY PP +
Sbjct: 60 SGGNAKGGAAILIKNSLAHFPLTPIATAKVQLAPAVIE-TALGPISFGAVYCPPRFAWTT 118
Query: 560 SDVEALLG-MGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYP 736
+ + +L + I+AGD N H W + + G L LV + D +A PT YP
Sbjct: 119 DEFKDILEEFQTKFIVAGDWNASHWLWGAGRSNQRGIALANLVLNSEVDSLATGGPTRYP 178
Query: 737 LNIAHRPDILDIAL 778
P +D AL
Sbjct: 179 YGCRGSPGYIDFAL 192
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 76.6 bits (180), Expect = 4e-14
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 5/194 (2%)
Frame = +2
Query: 212 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLSA 391
S+ I +NA G++ +++ F+ + ID+ L+ ET L + + I Y +
Sbjct: 3 SLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTN-KNNFHIPGYLFYGTNHPDG 61
Query: 392 RG-GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD- 565
+ GGT I R + L+ ++++ + L + +A+VY PP + +S D
Sbjct: 62 KAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-NGSTTLAAVYCPP-RFPISEDQ 119
Query: 566 -VEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALV-DDLAFDIVAPLTPTHYP 736
+E +G I AGD N KH W S TP G++L +AL + D V+P PT++P
Sbjct: 120 FMEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTKPENKLDYVSPGKPTYWP 179
Query: 737 LNIAHRPDILDIAL 778
+ PD++D A+
Sbjct: 180 ADPRKIPDLIDFAI 193
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 74.9 bits (176), Expect = 1e-13
Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 5/194 (2%)
Frame = +2
Query: 212 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLSA 391
S+ I +NA G++ +++ F+ + ID+ L+ ET L + + I Y +
Sbjct: 3 SLRISLWNANGVSRHTQELTQFIYEKNIDVMLLSETHLTN-KNNFHIPGYLFYGTNHPDG 61
Query: 392 RG-GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSD- 565
+ GGT I R + L+ ++++ + L + +A+VY PP + +S D
Sbjct: 62 KAHGGTGILIRNRIKHHHLNNFDKNYLQSTSIALQLN-NGSTTLAAVYCPP-RFPISEDQ 119
Query: 566 -VEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALV-DDLAFDIVAPLTPTHYP 736
+E +G I AGD N KH W S +P G++L +AL + D V+P PT++P
Sbjct: 120 FMEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTKPENKLDYVSPGKPTYWP 179
Query: 737 LNIAHRPDILDIAL 778
+ PD++D A+
Sbjct: 180 ADPRKIPDLIDFAI 193
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 74.5 bits (175), Expect = 1e-13
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Frame = +2
Query: 212 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYN--MVRNDRL 385
++ IG++N+ G+ N+ +++ +++ I I LV ET L+ I ++ + +N
Sbjct: 13 TLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTS 72
Query: 386 SARGGGTVIYYRRALH-CV-PLDPP-----ALANIEASVCRISLTGHAPIVIASVY--LP 538
+GG I + H C+ P++ +A I +S R +T API VY
Sbjct: 73 HRKGGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTT 132
Query: 539 PDKIVLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAP 715
L + E LL S IL GD NCKH W ++ + GR L +++ DIVA
Sbjct: 133 EQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVAT 192
Query: 716 LTPTHYPLNIAHRPDILDIAL 778
TH+P + +P LD A+
Sbjct: 193 GHATHFPFDKKKQPSALDFAI 213
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 74.5 bits (175), Expect = 1e-13
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Frame = +2
Query: 212 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYN--MVRNDRL 385
++ IG++N+ G+ N+ +++ +++ I I LV ET L+ I ++ + +N
Sbjct: 13 TLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTS 72
Query: 386 SARGGGTVIYYRRALH-CV-PLDPP-----ALANIEASVCRISLTGHAPIVIASVY--LP 538
+GG I + H C+ P++ +A I +S R +T API VY
Sbjct: 73 HRKGGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTT 132
Query: 539 PDKIVLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAP 715
L + E LL S IL GD NCKH W ++ + GR L +++ DIVA
Sbjct: 133 EQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVAT 192
Query: 716 LTPTHYPLNIAHRPDILDIAL 778
TH+P + +P LD A+
Sbjct: 193 GHATHFPFDKKKQPSALDFAI 213
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 74.5 bits (175), Expect = 1e-13
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Frame = +2
Query: 212 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYN--MVRNDRL 385
++ IG++N+ G+ N+ +++ +++ I I LV ET L+ I ++ + +N
Sbjct: 13 TLKIGYWNSCGITNKTNELEAYIKKEGIQIMLVTETRLERNSNALNIKGFHTYLAQNPTS 72
Query: 386 SARGGGTVIYYRRALH-CV-PLDPP-----ALANIEASVCRISLTGHAPIVIASVY--LP 538
+GG I + H C+ P++ +A I +S R +T API VY
Sbjct: 73 HRKGGTATIVSQNIRHACLNPIETDFMQSAPIALIPSSRIRADMTIVAPIYCPPVYKWTT 132
Query: 539 PDKIVLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAP 715
L + E LL S IL GD NCKH W ++ + GR L +++ DIVA
Sbjct: 133 EQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNYLSCARGRSLSQSILARKDLDIVAT 192
Query: 716 LTPTHYPLNIAHRPDILDIAL 778
TH+P + +P LD A+
Sbjct: 193 GHATHFPFDKKKQPSALDFAI 213
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 69.7 bits (163), Expect = 4e-12
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 4/197 (2%)
Frame = +2
Query: 200 IKPLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRND 379
+ PL + I +NA G++ + V F + ++DI LV E LK KI Y
Sbjct: 1 MNPLKILI--WNANGISRKAKDVELFAHNKKVDILLVTELRLKRGET-VKIYGYAYYPAY 57
Query: 380 RLSARG---GGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPD-K 547
R S GG ++ R L P +I+ S +++ TG + +++Y P +
Sbjct: 58 RPSLNNNSVGGVAVFVRTTLRHFPQRVIETRHIQLSSVKVA-TGLGDLQFSAIYCSPSTR 116
Query: 548 IVLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPT 727
I + + G ++ GD N +H W +P GR L + I+A +PT
Sbjct: 117 IEERHFTDIIRACGQRYLVGGDWNARHWLWGDTCNSPRGRELAEALSVTGAKILATGSPT 176
Query: 728 HYPLNIAHRPDILDIAL 778
YP +H P +D A+
Sbjct: 177 RYPYVPSHTPSCIDFAV 193
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 65.7 bits (153), Expect = 7e-11
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 7/181 (3%)
Frame = +2
Query: 209 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRD---PK-IANYNMVRN 376
+++TI +N +G+ N ++++ ++DH DI +QET L + PK + Y +
Sbjct: 1 MTITILQWNIHGIFNNYNELTLLIKDHAPDIVFLQETKLPCNSTNFICPKEYSGYFHNFS 60
Query: 377 DRLSARGGGTVIYYRRALHCVPLDPPALANIEASV-CR-ISLTGHAPIVIASVYLPPDKI 550
SA+ G V+ R H NI +S+ C + L I I + Y+PP +I
Sbjct: 61 YNTSAKQGIGVLIKRNVPH-------TYRNINSSILCSALQLNFEQVINIVNAYIPPSQI 113
Query: 551 VLSSDV-EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPT 727
SSD+ E L + S IL GDLN W S T G++++ ++ + + ++ +PT
Sbjct: 114 FSSSDISEILQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVILENSLIVLNDGSPT 173
Query: 728 H 730
H
Sbjct: 174 H 174
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 65.3 bits (152), Expect = 9e-11
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 12/198 (6%)
Frame = +2
Query: 221 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 394
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 24 IAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPASSKR 83
Query: 395 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS--- 559
GG I H P++ + + + + IVIASVY PP
Sbjct: 84 GGVATIVNSSLRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 143
Query: 560 SDV----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTP 724
+DV E +G + +IL GD N KH +W G L DA+ D +IVA +
Sbjct: 144 TDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAALYDAIQADSMAEIVATGSA 203
Query: 725 THYPLNIAHRPDILDIAL 778
TH+P + P +D ++
Sbjct: 204 THFPHDTRKSPSAIDFSI 221
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 64.5 bits (150), Expect = 2e-10
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Frame = +2
Query: 221 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 394
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIIIVTETRLDNNSTKLELPGYFTYLAQNPVSSKR 71
Query: 395 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS--- 559
GG I H P++ + + + + IVIASVY PP L
Sbjct: 72 GGVATIVNSSIRHMALKPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLRWLPHHF 131
Query: 560 SDV----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTP 724
+DV E LG + IL GD N KH +W G L +A+ D +I+A
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADSTAEIIATGCA 191
Query: 725 THYPLNIAHRPDILDIAL 778
TH+P + P +D ++
Sbjct: 192 THFPHDTRKNPSAIDFSI 209
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 62.5 bits (145), Expect = 6e-10
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 18/207 (8%)
Frame = +2
Query: 212 SVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLSA 391
++ I +NA + N+R ++ FL ++ I I L+ ET L + R I Y + RNDR +
Sbjct: 11 NLNIMAWNARAVRNKRIELIKFLENNHIHIALINETWLTHSDRF-NIPEYTIYRNDRKES 69
Query: 392 RGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVY--------LPPD- 544
RGGG I L + IE +I+ ++ + I S+Y +P
Sbjct: 70 RGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSIYFAGNTSKCIPSSC 129
Query: 545 ---------KIVLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLA 697
K + SD+ + + + ++ GD N +H W G+ L+ L D
Sbjct: 130 DLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGK 189
Query: 698 FDIVAPLTPTHYPLNIAHRPDILDIAL 778
F I+ P PT+ P N + LD+ L
Sbjct: 190 FSILYPTQPTYIPHNHKAKASTLDLCL 216
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.7 bits (143), Expect = 1e-09
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 12/198 (6%)
Frame = +2
Query: 221 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 394
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71
Query: 395 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS--- 559
GG I H P++ + + + + IVIASVY PP
Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131
Query: 560 SDV----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTP 724
+DV E LG + IL GD N KH +W G L +A+ D +I+A
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCA 191
Query: 725 THYPLNIAHRPDILDIAL 778
TH+P + P +D ++
Sbjct: 192 THFPHDTRKNPSAIDFSI 209
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.7 bits (143), Expect = 1e-09
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 12/198 (6%)
Frame = +2
Query: 221 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 394
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71
Query: 395 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS--- 559
GG I H P++ + + + + IVIASVY PP
Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131
Query: 560 SDV----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTP 724
+DV E LG + IL GD N KH +W G L +A+ D +I+A
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCA 191
Query: 725 THYPLNIAHRPDILDIAL 778
TH+P + P +D ++
Sbjct: 192 THFPHDTRKNPSAIDFSI 209
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 61.7 bits (143), Expect = 1e-09
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 12/198 (6%)
Frame = +2
Query: 221 IGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANY--NMVRNDRLSAR 394
I F+NA G+ N+ D++ F+ + I +V ET L ++ Y + +N S R
Sbjct: 12 IAFWNAGGINNKIDELKLFILNIDAHIVIVTETRLDNKSTKLELPGYFTYLAQNPVSSKR 71
Query: 395 GGGTVIYYRRALHCV--PLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLS--- 559
GG I H P++ + + + + IVIASVY PP
Sbjct: 72 GGVATIVNSSIRHMALEPIEKECIQSAPIVLLPENNRRSEMIVIASVYCPPSLSWSPHHF 131
Query: 560 SDV----EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTP 724
+DV E LG + IL GD N KH +W G L +A+ D +I+A
Sbjct: 132 TDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCA 191
Query: 725 THYPLNIAHRPDILDIAL 778
TH+P + P +D ++
Sbjct: 192 THFPHDTRKNPSAIDFSI 209
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 55.6 bits (128), Expect = 7e-08
Identities = 38/176 (21%), Positives = 75/176 (42%), Gaps = 1/176 (0%)
Frame = +2
Query: 209 LSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRNDRLS 388
+S+TI +N G N + ++ + I +QET ++ P NY ++ N +
Sbjct: 1 MSLTIIQWNLKGYLNNYSHLLILIKKYSPHIISLQETHIQYTNNIPTPINYKLLTNIATN 60
Query: 389 ARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDKIVLSSDV 568
GG ++ ++ H V I+ I++ + I S Y+ P K + + +
Sbjct: 61 RFGGVRLLVHKSIQHTV-----LNITIDIEAIAINIESKLKLNIFSTYISPTKNITNQTL 115
Query: 569 EALLGMGSSV-ILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHY 733
+ + ++ GD N H W S TT G+ +D++ ++ +PTH+
Sbjct: 116 HNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRGKITHRFIDNMHLILLNDKSPTHF 171
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 46.4 bits (105), Expect = 4e-05
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 12/170 (7%)
Frame = +2
Query: 305 LVQETLLKPARRDPKIANY--NMVRNDRLSARGGGTVIYYRRALHCV--PLDPPALANIE 472
+V ET L ++ Y + +N S RGG I H P++ + +
Sbjct: 2 IVTETRLDNKSTKLELPGYFTYLAQNPVSSKRGGVATIVNSSIRHMALEPIEKECIQSAP 61
Query: 473 ASVCRISLTGHAPIVIASVYLPPDKIVLS---SDV----EALLGMGSSVILAGDLNCKHI 631
+ + IVIASVY PP +DV E LG + IL GD N KH
Sbjct: 62 IVLLPENNRRSEMIVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHR 121
Query: 632 RWNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIAL 778
+W G L +A+ D +I+A TH+P + P +D ++
Sbjct: 122 QWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSI 171
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 45.6 bits (103), Expect = 8e-05
Identities = 42/161 (26%), Positives = 64/161 (39%), Gaps = 18/161 (11%)
Frame = +2
Query: 350 IANYNMVRNDRLSARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASV 529
I Y + RNDR +RGGG I L + IE +I+ ++ + I S+
Sbjct: 4 IPEYTIYRNDRKESRGGGVAIAVSNTLIHEQIPCIKSHVIENVGIQINTDSNSSLKIYSI 63
Query: 530 YLP-------PDKIVLS-----------SDVEALLGMGSSVILAGDLNCKHIRWNSHTTT 655
Y P LS SD+ + + + ++ GD N +H W
Sbjct: 64 YFAGNTSKCIPSSCDLSWDHNHLKSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRAN 123
Query: 656 PNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIAL 778
G+ L+ L D F I+ P PT+ P N + LD+ L
Sbjct: 124 GWGKILNELSDLGKFSILYPTQPTYIPHNHKAKASTLDLCL 164
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 569 EALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNI 745
E LG + IL GD N KH +W G L +A+ D +I+A TH+P +
Sbjct: 23 EKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDT 82
Query: 746 AHRPDILDIAL 778
P +D ++
Sbjct: 83 RKNPSAIDFSI 93
>BT011177-1|AAR88538.1| 85|Drosophila melanogaster RH16194p
protein.
Length = 85
Score = 32.3 bits (70), Expect = 0.77
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = +2
Query: 359 YNMVRNDRLSARGGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLP 538
Y M R DR S RGGG +I R L L N E ++S + + + I Y+P
Sbjct: 2 YTMYRYDRPSRRGGGVLIAVRSTLASEELLFDESRNSEFLCVKLSFSDRS-VYITCSYIP 60
Query: 539 P 541
P
Sbjct: 61 P 61
>AE014296-2334|AAO41253.1| 653|Drosophila melanogaster CG17364-PB,
isoform B protein.
Length = 653
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 527 VYLPPDKIVLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGR 667
V+ PD LSSD+ LLG+ + + + L C + S T P R
Sbjct: 228 VFCTPDLSELSSDLPTLLGVSTGIAVLAGLICMVLHLFSKTKYPRHR 274
>AE014296-2333|AAF49781.3| 804|Drosophila melanogaster CG17364-PA,
isoform A protein.
Length = 804
Score = 30.3 bits (65), Expect = 3.1
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 527 VYLPPDKIVLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGR 667
V+ PD LSSD+ LLG+ + + + L C + S T P R
Sbjct: 228 VFCTPDLSELSSDLPTLLGVSTGIAVLAGLICMVLHLFSKTKYPRHR 274
>AY069120-1|AAL39265.1| 224|Drosophila melanogaster GH13185p
protein.
Length = 224
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 587 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAP 715
G S+ LA D+N K T T NG RLD++ LA D + P
Sbjct: 66 GFSLCLATDINPKACNATRRTATRNGARLDSIRCSLA-DALRP 107
>AE014134-460|AAF51216.1| 224|Drosophila melanogaster CG9960-PA,
isoform A protein.
Length = 224
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +2
Query: 587 GSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAP 715
G S+ LA D+N K T T NG RLD++ LA D + P
Sbjct: 66 GFSLCLATDINPKACNATRRTATRNGARLDSIRCSLA-DALRP 107
>M81887-1|AAA28844.1| 2248|Drosophila melanogaster rutabaga adenylyl
cyclase protein.
Length = 2248
Score = 29.1 bits (62), Expect = 7.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +2
Query: 248 ANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRN-----DRLSARGGGTVI 412
A D+ S +LRDH +D F + + P RR P + N VR+ +LS R V+
Sbjct: 428 AGHGDERSSYLRDHGVDTFFI---VPPPHRRKPLMLNTLGVRSAIGSRRKLSFRNVSNVV 484
Query: 413 YYRRALHCVPLDPP 454
+ LH + P
Sbjct: 485 --MQLLHTIKFSEP 496
>AE014298-2053|AAF48388.1| 2248|Drosophila melanogaster CG9533-PA
protein.
Length = 2248
Score = 29.1 bits (62), Expect = 7.2
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Frame = +2
Query: 248 ANQRDQVSDFLRDHQIDIFLVQETLLKPARRDPKIANYNMVRN-----DRLSARGGGTVI 412
A D+ S +LRDH +D F + + P RR P + N VR+ +LS R V+
Sbjct: 428 AGHGDERSSYLRDHGVDTFFI---VPPPHRRKPLMLNTLGVRSAIGSRRKLSFRNVSNVV 484
Query: 413 YYRRALHCVPLDPP 454
+ LH + P
Sbjct: 485 --MQLLHTIKFSEP 496
>AY071121-1|AAL48743.1| 119|Drosophila melanogaster RE17113p
protein.
Length = 119
Score = 28.7 bits (61), Expect = 9.5
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 249 ARP*ALKNPIVTDRGFILLIYAIDYR-RSEGRTYVFNDAYTSAYSCTTAIKCCAVEAARM 73
A P A P V + YA Y S + F AYT+AY+ A A AA
Sbjct: 27 AAPLAYTAPAVVGSAAYVAPYASSYSAHSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAY 86
Query: 72 ASPKA 58
A+P A
Sbjct: 87 AAPIA 91
>AE014296-1399|AAN12016.1| 119|Drosophila melanogaster CG13679-PB,
isoform B protein.
Length = 119
Score = 28.7 bits (61), Expect = 9.5
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 249 ARP*ALKNPIVTDRGFILLIYAIDYR-RSEGRTYVFNDAYTSAYSCTTAIKCCAVEAARM 73
A P A P V + YA Y S + F AYT+AY+ A A AA
Sbjct: 27 AAPLAYTAPAVVGSAAYVAPYASSYSAHSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAY 86
Query: 72 ASPKA 58
A+P A
Sbjct: 87 AAPIA 91
>AE014296-1398|AAF50465.1| 145|Drosophila melanogaster CG13679-PA,
isoform A protein.
Length = 145
Score = 28.7 bits (61), Expect = 9.5
Identities = 22/65 (33%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -1
Query: 249 ARP*ALKNPIVTDRGFILLIYAIDYR-RSEGRTYVFNDAYTSAYSCTTAIKCCAVEAARM 73
A P A P V + YA Y S + F AYT+AY+ A A AA
Sbjct: 53 AAPLAYTAPAVVGSAAYVAPYASSYSAHSVAHSAAFPAAYTAAYTAPVAAAYTAPVAAAY 112
Query: 72 ASPKA 58
A+P A
Sbjct: 113 AAPIA 117
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,131,903
Number of Sequences: 53049
Number of extensions: 691052
Number of successful extensions: 1655
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1632
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3623012976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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