Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1342
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 39 0.003
AF016445-6|AAC69053.1| 250|Caenorhabditis elegans Hypothetical ... 34 0.13
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 33 0.17
Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical p... 33 0.23
AF016445-5|AAC69059.1| 250|Caenorhabditis elegans Hypothetical ... 31 1.2
AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical ... 31 1.2
U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF016445-8|AAC69052.1| 244|Caenorhabditis elegans Hypothetical ... 29 2.8
AF099002-3|AAO91691.1| 570|Caenorhabditis elegans Hypothetical ... 29 4.9
AF099002-2|AAC68740.2| 556|Caenorhabditis elegans Hypothetical ... 29 4.9
AF099002-1|AAK68587.1| 559|Caenorhabditis elegans Hypothetical ... 29 4.9
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 6.5
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 6.5
Z81529-11|CAB04297.1| 249|Caenorhabditis elegans Hypothetical p... 28 8.6
Z81529-8|CAB04291.1| 249|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF022971-13|AAG23979.1| 325|Caenorhabditis elegans Serpentine r... 28 8.6
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 39.1 bits (87), Expect = 0.003
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 22/173 (12%)
Frame = +2
Query: 191 ISRIKPLSVTIGFFNAYGLANQRDQVSDFLRDHQIDIFLVQETLLK---PAR--RDPKIA 355
I +IK ++ ++ + + +F IDI L+ ET L P+ P ++
Sbjct: 311 IHKIKNINFSLANVRGVSALPKIIMLKEFFASSDIDILLLTETFLSNIVPSSLFNAPNMS 370
Query: 356 NYNMVRNDRLSAR--GGGTVIYYRRALHCVPLDPPALANIEASVCRI----------SLT 499
+ RN L ++ GGG + ++ +L+ D + C I + +
Sbjct: 371 FLRLDRNPELHSKVSGGGVAVMHKSSLNITLRDINFETHYPKHRCEILAFDIHNAEPASS 430
Query: 500 GHAPIVIASVYLPP-----DKIVLSSDVEALLGMGSSVILAGDLNCKHIRWNS 643
+P+ I +Y PP + L + +E+ + + S ILAGDLN I W+S
Sbjct: 431 ASSPLSIFLIYRPPCCSVSENAALIAHLESYIPL-SRTILAGDLNFPQINWSS 482
>AF016445-6|AAC69053.1| 250|Caenorhabditis elegans Hypothetical
protein T05B4.10 protein.
Length = 250
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 551 VLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPT- 727
++S + + L S ++ GDLNC ++ TP L+ D + ++ P T T
Sbjct: 4 LISMMIVSFLAPDVSAVIGGDLNCTQYNGSAFVWTPAAVACSNLISDASCAVLYPTTDTL 63
Query: 728 HYPL--NIAHRP 757
YP N A RP
Sbjct: 64 GYPAPGNAAGRP 75
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +2
Query: 518 IASVYLPP-----DKIVLSSDVEALLGMGSSVILAGDLNCKHIRWNSH-TTTPNGRRLDA 679
I++VY+PP + L +D + S I++GD+N H W+S + GR L
Sbjct: 3 ISNVYVPPRSSSSNHARLMTDFSNIFQTKSKSIISGDVNAHHSAWHSEGSEDTRGRELAE 62
Query: 680 LVD 688
L+D
Sbjct: 63 LID 65
>Z81116-13|CAB03300.1| 245|Caenorhabditis elegans Hypothetical
protein T06C12.14 protein.
Length = 245
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 548 IVLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIV--APLT 721
I L S + ALL +S ++ GDLNC ++ TP ++ D + ++ AP+
Sbjct: 2 IALVSFILALLAPQASAVIGGDLNCTSYNGSAFVWTPAATACSNVISDSSCAVLYPAPVP 61
Query: 722 PTHYP 736
YP
Sbjct: 62 ADGYP 66
>AF016445-5|AAC69059.1| 250|Caenorhabditis elegans Hypothetical
protein T05B4.9 protein.
Length = 250
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +2
Query: 551 VLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPT- 727
++S + + L S ++ GDLNC ++ TP + D + ++ P T T
Sbjct: 4 LISMMIVSFLAPDVSAVIGGDLNCTTFNGSAFVWTPAAVACSNFISDASCAVLYPTTDTL 63
Query: 728 --HYPLNIAHRP 757
P N A RP
Sbjct: 64 GFPAPGNAAGRP 75
>AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical
protein T05B4.8 protein.
Length = 312
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +2
Query: 515 VIASVYLPPDKIVLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDL 694
V+ S+ L ++S +L +S ++ GDLNC + TP+ + D
Sbjct: 54 VVLSLLLNKMIALVSLFFVSLFAPEASAVIGGDLNCTTYNGTAFVWTPSAVACSNTISDA 113
Query: 695 AFDIVAPLTPT-HYPL--NIAHRP 757
+ I+ P T T +P N A RP
Sbjct: 114 SCAILYPTTDTLGFPAAGNAAGRP 137
>U41263-2|ABB88212.1| 1015|Caenorhabditis elegans Hypothetical protein
T19D12.4b protein.
Length = 1015
Score = 29.5 bits (63), Expect = 2.8
Identities = 37/196 (18%), Positives = 74/196 (37%), Gaps = 9/196 (4%)
Frame = +2
Query: 59 ALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR*SMAYISRIKPLSVTI----- 223
A GD +++ S F+ +V L P +M ++ I +T
Sbjct: 496 AAGDKLKSISVISFFVGYSSYSDEVKTELGKVSEPKYIFGNMTFLPEITAQILTTYPCPV 555
Query: 224 -GFFNAYGLANQRDQVSDFLRDHQIDIFLV--QETLLKPARRDPKIANYNMVRNDRLSAR 394
AY + D++ + DI + Q + ++ +I YN +N + + +
Sbjct: 556 PKCVTAYYAIEISEATDDYVVQNLQDILNIATQASTMQTGTESYQIVTYNDAQNTQFNPK 615
Query: 395 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDK-IVLSSDVE 571
G + ++ + + DP +A + + R+ L V A + K I SSD+
Sbjct: 616 GDASFASFKAFVQGLIADPKRIAAMRRGITRLDLA--IDDVTAEMKAQATKNIRFSSDI- 672
Query: 572 ALLGMGSSVILAGDLN 619
G + +L D++
Sbjct: 673 LFFGQANDAVLKPDVD 688
>U41263-1|AAC24429.1| 1028|Caenorhabditis elegans Hypothetical protein
T19D12.4a protein.
Length = 1028
Score = 29.5 bits (63), Expect = 2.8
Identities = 37/196 (18%), Positives = 74/196 (37%), Gaps = 9/196 (4%)
Frame = +2
Query: 59 ALGDAIRAASTAQHFIAVVQEYADVYASLNTYVLPSLRR*SMAYISRIKPLSVTI----- 223
A GD +++ S F+ +V L P +M ++ I +T
Sbjct: 509 AAGDKLKSISVISFFVGYSSYSDEVKTELGKVSEPKYIFGNMTFLPEITAQILTTYPCPV 568
Query: 224 -GFFNAYGLANQRDQVSDFLRDHQIDIFLV--QETLLKPARRDPKIANYNMVRNDRLSAR 394
AY + D++ + DI + Q + ++ +I YN +N + + +
Sbjct: 569 PKCVTAYYAIEISEATDDYVVQNLQDILNIATQASTMQTGTESYQIVTYNDAQNTQFNPK 628
Query: 395 GGGTVIYYRRALHCVPLDPPALANIEASVCRISLTGHAPIVIASVYLPPDK-IVLSSDVE 571
G + ++ + + DP +A + + R+ L V A + K I SSD+
Sbjct: 629 GDASFASFKAFVQGLIADPKRIAAMRRGITRLDLA--IDDVTAEMKAQATKNIRFSSDI- 685
Query: 572 ALLGMGSSVILAGDLN 619
G + +L D++
Sbjct: 686 LFFGQANDAVLKPDVD 701
>AF016445-8|AAC69052.1| 244|Caenorhabditis elegans Hypothetical
protein T05B4.12 protein.
Length = 244
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = +2
Query: 590 SSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIVAPLTPTHYP 736
SS ++ GDLNC S TP + D + ++ T YP
Sbjct: 13 SSAVIGGDLNCTSYNGTSFVYTPAAVACSNAISDASCQVLYAAPDTLYP 61
>AF099002-3|AAO91691.1| 570|Caenorhabditis elegans Hypothetical
protein Y71H10B.1c protein.
Length = 570
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 47 ERVNALGDAIRAASTAQHFIAVVQEYADVYAS 142
E LG R F + V+ YADVYAS
Sbjct: 415 EEYGCLGSLFRTGGRTTFFASQVERYADVYAS 446
>AF099002-2|AAC68740.2| 556|Caenorhabditis elegans Hypothetical
protein Y71H10B.1a protein.
Length = 556
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 47 ERVNALGDAIRAASTAQHFIAVVQEYADVYAS 142
E LG R F + V+ YADVYAS
Sbjct: 401 EEYGCLGSLFRTGGRTTFFASQVERYADVYAS 432
>AF099002-1|AAK68587.1| 559|Caenorhabditis elegans Hypothetical
protein Y71H10B.1b protein.
Length = 559
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 47 ERVNALGDAIRAASTAQHFIAVVQEYADVYAS 142
E LG R F + V+ YADVYAS
Sbjct: 404 EEYGCLGSLFRTGGRTTFFASQVERYADVYAS 435
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 595 RAPHTEQRLDITA*NDLIRWKINGRDND 512
R + E ++ A +D + WK+NG+D D
Sbjct: 13887 RGDNVEIEAELLAEDDTVTWKVNGKDAD 13914
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 595 RAPHTEQRLDITA*NDLIRWKINGRDND 512
R + E ++ A +D + WK+NG+D D
Sbjct: 13887 RGDNVEIEAELLAEDDTVTWKVNGKDAD 13914
>Z81529-11|CAB04297.1| 249|Caenorhabditis elegans Hypothetical
protein F35E8.13 protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 548 IVLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIV--APLT 721
I L S + ALL +S ++ GDLNC + ++ D + ++ AP+
Sbjct: 2 IALVSFILALLAPQASAVIGGDLNCTSYNGTAFVWNAAATACSNVISDSSCAVLYPAPVA 61
Query: 722 PTHYP 736
YP
Sbjct: 62 ADGYP 66
>Z81529-8|CAB04291.1| 249|Caenorhabditis elegans Hypothetical
protein F35E8.10 protein.
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 548 IVLSSDVEALLGMGSSVILAGDLNCKHIRWNSHTTTPNGRRLDALVDDLAFDIV--APLT 721
I L S + ALL +S ++ GDLNC + ++ D + ++ AP+
Sbjct: 2 IALVSFILALLAPQASAVIGGDLNCTSYNGTAFVWNAAATACSNVISDSSCAVLYPAPVA 61
Query: 722 PTHYP 736
YP
Sbjct: 62 ADGYP 66
>AF022971-13|AAG23979.1| 325|Caenorhabditis elegans Serpentine
receptor, class h protein247 protein.
Length = 325
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 660 FGVVVCEFHLMCLQFRSPARMTEL 589
F + VC F C+ F++P RMT +
Sbjct: 26 FEIPVCTFGAYCILFKTPERMTSV 49
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,338,506
Number of Sequences: 27780
Number of extensions: 332613
Number of successful extensions: 819
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 819
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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