Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1337
         (812 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024200-13|AAF36004.1|  214|Caenorhabditis elegans Glutathione ...    38   0.006
Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical p...    33   0.24 
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...    33   0.24 
U00032-9|AAA50631.1|  229|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z93377-6|CAB07572.2|  254|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z67756-1|CAA91762.1|  157|Caenorhabditis elegans Hypothetical pr...    29   5.2  
AF025462-3|AAB71002.1|  309|Caenorhabditis elegans Hypothetical ...    28   6.9  
Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical p...    28   9.1  
Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical pr...    28   9.1  
L16622-3|ABC71837.1|  254|Caenorhabditis elegans Hypothetical pr...    28   9.1  
L16622-1|ABB51198.1|  537|Caenorhabditis elegans Hypothetical pr...    28   9.1  
AF016684-15|AAB66214.1|  543|Caenorhabditis elegans Hypothetical...    28   9.1  
AF016448-13|AAB65963.1|  239|Caenorhabditis elegans Hypothetical...    28   9.1  

>AC024200-13|AAF36004.1|  214|Caenorhabditis elegans Glutathione
           s-transferase protein43 protein.
          Length = 214

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +1

Query: 7   MAAGVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSE-DFLKKFPAGKVPAFE 183
           MA  +LY+Y  +  A++  IA      D +  P  +F E +K+  +F+K  PA KVP   
Sbjct: 1   MAKPILYSYWRSSCAWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTL- 59

Query: 184 SADGKVLLTESNAIAYY 234
                + LTES AI  Y
Sbjct: 60  -VINGLSLTESLAIIEY 75


>Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical
           protein F17C11.9c protein.
          Length = 365

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 26/73 (35%), Positives = 36/73 (49%)
 Frame = +1

Query: 16  GVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 195
           G LY   +NFR  K LIAA+ +   V +A     G+   ++    KFP G  PAFE   G
Sbjct: 3   GKLYGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---G 50

Query: 196 KVLLTESNAIAYY 234
             LL  + +I  +
Sbjct: 51  DALLFGAESIGLH 63


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score = 33.1 bits (72), Expect = 0.24
 Identities = 26/73 (35%), Positives = 36/73 (49%)
 Frame = +1

Query: 16  GVLYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADG 195
           G LY   +NFR  K LIAA+ +   V +A     G+   ++    KFP G  PAFE   G
Sbjct: 3   GKLYGNKDNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---G 50

Query: 196 KVLLTESNAIAYY 234
             LL  + +I  +
Sbjct: 51  DALLFGAESIGLH 63


>U00032-9|AAA50631.1|  229|Caenorhabditis elegans Hypothetical
           protein F37A4.3 protein.
          Length = 229

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 489 LMKQYS*FPLKIIIEDTHKSVIIFNYCIIFYNPNHTPF 602
           L K  S  P+  I+ D H  V  FNYCII     ++PF
Sbjct: 127 LSKFDSHLPIYTILRDFHADVN-FNYCIIMRTQQNSPF 163


>Z93377-6|CAB07572.2|  254|Caenorhabditis elegans Hypothetical
           protein F13A7.10 protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
 Frame = +1

Query: 34  PENFRAYKALI--AAQYS--GTDVKVAPNFVFGET--NKSEDFLKKFPAGKVPAFESADG 195
           P  FR Y      AAQ +     VK  P+ V       K + +  K   G+VP  E A+G
Sbjct: 24  PNTFRIYSMRFCPAAQRALIYASVKKIPSEVININLQQKPDWYFTKNYKGQVPTLEHAEG 83

Query: 196 KVLLTESNAIAYY 234
           K L+ ES  I  Y
Sbjct: 84  KKLVIESAVIPEY 96


>Z67756-1|CAA91762.1|  157|Caenorhabditis elegans Hypothetical
           protein R07A4.2 protein.
          Length = 157

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = -3

Query: 156 KLLQEVFGLVGLAKYEIRCYFHISPGILCGDQRFISAEVFRISV 25
           K+LQ +FG + L+     CY +    + CG++ F S++VF++ V
Sbjct: 22  KILQLIFGFINLSA-NYWCYPN-QHFLYCGERYFTSSQVFQLIV 63


>AF025462-3|AAB71002.1|  309|Caenorhabditis elegans Hypothetical
           protein K10F12.4a protein.
          Length = 309

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 142 FLKKFPAGKVPAFESADGKVLLTESNAIAYYGEFF 246
           +L K P G+VPA E  +GKV+   +  + Y  E F
Sbjct: 138 YLPKSPIGRVPALE-INGKVVWESNVIVEYLDELF 171


>Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/80 (21%), Positives = 38/80 (47%)
 Frame = -1

Query: 545 FVGVLYNYF*RKL*VLFHQGKVMTRRFYEFLNQI**KNAFILVPSTNYVVESI*NNFARG 366
           F+G ++ YF + + +     ++  + FY    QI    AFI +P + +V+ S  + + + 
Sbjct: 214 FLGAIFRYFSQTVSLSATTARLQKQFFYSMCIQIFIPVAFISLPVSYFVMASENDYYNQA 273

Query: 365 IYNLIFFQATYFGLLGILLV 306
             N+        G+L  +++
Sbjct: 274 ATNIAMIAIACHGVLSTIVM 293


>Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 17/80 (21%), Positives = 38/80 (47%)
 Frame = -1

Query: 545 FVGVLYNYF*RKL*VLFHQGKVMTRRFYEFLNQI**KNAFILVPSTNYVVESI*NNFARG 366
           F+G ++ YF + + +     ++  + FY    QI    AFI +P + +V+ S  + + + 
Sbjct: 214 FLGAIFRYFSQTVSLSATTARLQKQFFYSMCIQIFIPVAFISLPVSYFVMASENDYYNQA 273

Query: 365 IYNLIFFQATYFGLLGILLV 306
             N+        G+L  +++
Sbjct: 274 ATNIAMIAIACHGVLSTIVM 293


>L16622-3|ABC71837.1|  254|Caenorhabditis elegans Hypothetical
           protein C02D5.3c protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 130 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYY 234
           K + F  K   G+VPA E  +GK ++ ES  I  Y
Sbjct: 62  KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEY 96


>L16622-1|ABB51198.1|  537|Caenorhabditis elegans Hypothetical
           protein C02D5.3a protein.
          Length = 537

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +1

Query: 130 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYY 234
           K + F  K   G+VPA E  +GK ++ ES  I  Y
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEY 379


>AF016684-15|AAB66214.1|  543|Caenorhabditis elegans Hypothetical
           protein F45C12.15 protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 620 EVKRKIKHLT*IKKGTLQLPMKVSAEEIWLPKP 718
           E KR+ K LT  +K T +LP K   +++ L +P
Sbjct: 60  EAKRRKKKLTNSRKSTSELPEKKKTDKVNLQRP 92


>AF016448-13|AAB65963.1|  239|Caenorhabditis elegans Hypothetical
           protein F41E6.1 protein.
          Length = 239

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 157 ETSSRSLRTCWSRQIRNSVLLSHQSRNIVR 68
           ET    +R CWSR   N+V      R++VR
Sbjct: 167 ETGGAIVRDCWSRVFSNAVKNPRARRDVVR 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,964,650
Number of Sequences: 27780
Number of extensions: 321200
Number of successful extensions: 872
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)