Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1336
         (805 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    26   1.2  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   1.2  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.6  
AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    25   2.7  
EF519476-1|ABP73561.1|  165|Anopheles gambiae CTLMA2 protein.          24   4.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   6.3  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   6.3  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   6.3  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    23   8.3  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = +3

Query: 9   YLNQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNECARLSRRHR 149
           YL        Y F I N   G + FI +C+    FR     + RRHR
Sbjct: 353 YLTILVQYYCYLFFITNF--G-INFILYCISGQNFRKAVIEMFRRHR 396


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
 Frame = +3

Query: 258 VKSRRYHQAAPPD-DELDPRDVTS--YNIHPETRWNVRPTAPIYVPND 392
           V SR      PP+ D  +   + S  +  HP   W V   AP  VP+D
Sbjct: 438 VMSRLRGSPGPPETDRAELERIVSDLFPTHPPVSWPVSSDAPTTVPSD 485


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 218 GVQLEPRRHAPGLRQEQEVPPGR 286
           G + E     PG+RQ+Q  PP R
Sbjct: 47  GEEEEDEEEGPGVRQKQSSPPAR 69


>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = +3

Query: 516 RSRSPSCFSNKMAASIGANEWAGSNAGASVWKNTSSKHHV-GNTSTLPHHDTL 671
           R+R P C     A+S G  E A S A A + +NT ++     N S +  +D+L
Sbjct: 542 RNRMPICCCFCCASSNGPMEGAESKAAAYLRQNTINQSGAERNNSDMSGNDSL 594


>EF519476-1|ABP73561.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 721 NQWAPGSPRHMKDEES 768
           +QWA G P H + E S
Sbjct: 114 SQWAAGEPNHARGENS 129


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 572 RMGGQQCRCQCMEEHFF*TPRWEHFHATASRHSL 673
           R  G   RC+   +    T RW HFH+   + SL
Sbjct: 521 REPGTAWRCRSCGKEV--TNRWHHFHSHTPQRSL 552


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 572 RMGGQQCRCQCMEEHFF*TPRWEHFHATASRHSL 673
           R  G   RC+   +    T RW HFH+   + SL
Sbjct: 497 REPGTAWRCRSCGKEV--TNRWHHFHSHTPQRSL 528


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 722 FALVRAVEVIWGRQLPGES 666
           F   R   V+WG++ PGE+
Sbjct: 322 FTYTRIAIVVWGKRPPGEA 340


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +3

Query: 84  IFHCLQNDKFRNE 122
           +FHC ++D+ RNE
Sbjct: 952 LFHCPRSDRIRNE 964


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 962,892
Number of Sequences: 2352
Number of extensions: 22527
Number of successful extensions: 115
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)