Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1336
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical pr...    45   6e-05
Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical pr...    45   6e-05
AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-l...    45   6e-05
AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-l...    45   6e-05
U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin rec...    37   0.015
AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-l...    37   0.015
AF025460-2|AAF02169.3|  545|Caenorhabditis elegans Prion-like-(q...    36   0.026
U82935-1|AAB40868.1|  680|Caenorhabditis elegans protein kinase ...    30   2.2  
U29376-3|AAM51503.1|  680|Caenorhabditis elegans Protein kinase ...    30   2.2  
Z81131-4|CAD01083.1|  415|Caenorhabditis elegans Hypothetical pr...    29   5.1  
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z78415-7|CAH60759.1|  844|Caenorhabditis elegans Hypothetical pr...    28   9.0  
Z78415-5|CAB01670.1|  925|Caenorhabditis elegans Hypothetical pr...    28   9.0  
U64608-9|AAX88815.1|  319|Caenorhabditis elegans Egg laying defe...    28   9.0  
U64608-8|AAO91671.1|  316|Caenorhabditis elegans Egg laying defe...    28   9.0  
U64608-7|AAX88814.1|  422|Caenorhabditis elegans Egg laying defe...    28   9.0  
U64608-6|AAB04597.2|  470|Caenorhabditis elegans Egg laying defe...    28   9.0  
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr...    28   9.0  
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li...    28   9.0  
AF097319-1|AAD12252.1|  470|Caenorhabditis elegans Sox domain pr...    28   9.0  

>Z54306-5|CAD59141.1| 1012|Caenorhabditis elegans Hypothetical
           protein B0457.1b protein.
          Length = 1012

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +3

Query: 15  NQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNE 122
           + +++VMAY FTI NSLQGL IF+FH +  +K R +
Sbjct: 765 DSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKD 800


>Z54306-4|CAA91091.1| 1014|Caenorhabditis elegans Hypothetical
           protein B0457.1a protein.
          Length = 1014

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +3

Query: 15  NQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNE 122
           + +++VMAY FTI NSLQGL IF+FH +  +K R +
Sbjct: 767 DSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKD 802


>AY314771-1|AAQ84878.1| 1012|Caenorhabditis elegans latrophilin-like
           protein LAT-1B protein.
          Length = 1012

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +3

Query: 15  NQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNE 122
           + +++VMAY FTI NSLQGL IF+FH +  +K R +
Sbjct: 765 DSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKD 800


>AY314770-1|AAQ84877.1| 1014|Caenorhabditis elegans latrophilin-like
           protein LAT-1A protein.
          Length = 1014

 Score = 45.2 bits (102), Expect = 6e-05
 Identities = 19/36 (52%), Positives = 27/36 (75%)
 Frame = +3

Query: 15  NQQTVVMAYAFTILNSLQGLVIFIFHCLQNDKFRNE 122
           + +++VMAY FTI NSLQGL IF+FH +  +K R +
Sbjct: 767 DSRSIVMAYVFTISNSLQGLFIFLFHVVFAEKMRKD 802


>U39848-1|AAT81210.1| 1338|Caenorhabditis elegans Latrophilin receptor
            protein 2 protein.
          Length = 1338

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = +3

Query: 36   AYAFTILNSLQGLVIFIFHCLQNDKFRNECARLSRRHRWLSCCL 167
            A+ FTILN  QG+ IF+ H + N+K R   A + R  R   CCL
Sbjct: 1115 AWIFTILNCTQGIFIFVLHVVLNEKVR---ASIVRWLRTGICCL 1155


>AY314772-1|AAQ84879.1| 1338|Caenorhabditis elegans latrophilin-like
            protein LAT-2 protein.
          Length = 1338

 Score = 37.1 bits (82), Expect = 0.015
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = +3

Query: 36   AYAFTILNSLQGLVIFIFHCLQNDKFRNECARLSRRHRWLSCCL 167
            A+ FTILN  QG+ IF+ H + N+K R   A + R  R   CCL
Sbjct: 1115 AWIFTILNCTQGIFIFVLHVVLNEKVR---ASIVRWLRTGICCL 1155


>AF025460-2|AAF02169.3|  545|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 41
           protein.
          Length = 545

 Score = 36.3 bits (80), Expect = 0.026
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
 Frame = +3

Query: 489 EIPNDYQNLRSRSPSCFSNKMA-ASIGANEWAGSNAGASVWKNTSSKHHVGNTSTLPHHD 665
           ++P D Q+  S S +  S     A  GA   + S A +S    +SS HH    S+ PHH 
Sbjct: 19  KLPTDIQSTSSSSAAPASAPAPRAGAGAGATSSSAASSSTSTPSSSSHH--KKSSPPHHQ 76

Query: 666 TLSRQLAPPNHL---HSPYECEPMGPWLTAPHE 755
             +   APP  +   H+P       P + AP +
Sbjct: 77  KSAAPSAPPRDVTSAHAPPPPASSAPIVGAPRQ 109


>U82935-1|AAB40868.1|  680|Caenorhabditis elegans protein kinase C2
           A isoform protein.
          Length = 680

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 576 IRSRQSRPPFCSKSKMANATSDFDNRSVFPSP 481
           I +RQ +PPF  K K A+ TS+FD+      P
Sbjct: 617 IETRQIQPPFKPKLKSADDTSNFDSEFTHEVP 648


>U29376-3|AAM51503.1|  680|Caenorhabditis elegans Protein kinase c
           protein 2, isoforma protein.
          Length = 680

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = -2

Query: 576 IRSRQSRPPFCSKSKMANATSDFDNRSVFPSP 481
           I +RQ +PPF  K K A+ TS+FD+      P
Sbjct: 617 IETRQIQPPFKPKLKSADDTSNFDSEFTHEVP 648


>Z81131-4|CAD01083.1|  415|Caenorhabditis elegans Hypothetical
           protein T24D1.5 protein.
          Length = 415

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
 Frame = -2

Query: 615 CSS--IHWHRHC----CPPIRSRQSRPPFCSKSKMANATSDFDNR 499
           CS+  +HWH H     CP  R R SR P  S   + +  S   +R
Sbjct: 369 CSACIVHWHHHALSPSCPLCRRRWSRQPDVSNMNVISQRSTIAHR 413


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
           protein T01D3.7 protein.
          Length = 2882

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -1

Query: 472 CIDAMLCECDALW-GMFCGVGTRIDLASSFG 383
           CI    CECDA W G  C V + ID   + G
Sbjct: 837 CIQPNSCECDAGWMGETCSVTSCIDSQCTHG 867


>Z78415-7|CAH60759.1|  844|Caenorhabditis elegans Hypothetical
           protein C17G1.4b protein.
          Length = 844

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +3

Query: 564 GANEWAGSNAGASVWKNTSSKHHVGNTSTLPHHDTLSRQLAPPNH 698
           G++   GSNA  S  K +  +  + N   LPHH      L  PNH
Sbjct: 375 GSHGTVGSNAPLSHQKPSQQQQSMHNH--LPHHQYNQNNLLSPNH 417


>Z78415-5|CAB01670.1|  925|Caenorhabditis elegans Hypothetical
           protein C17G1.4a protein.
          Length = 925

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +3

Query: 564 GANEWAGSNAGASVWKNTSSKHHVGNTSTLPHHDTLSRQLAPPNH 698
           G++   GSNA  S  K +  +  + N   LPHH      L  PNH
Sbjct: 375 GSHGTVGSNAPLSHQKPSQQQQSMHNH--LPHHQYNQNNLLSPNH 417


>U64608-9|AAX88815.1|  319|Caenorhabditis elegans Egg laying
           defective protein 13,isoform d protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +3

Query: 546 KMAASIGANEWAGSNAGASVWKNTSSKHHVGNTSTLPHHDTLSRQLAPPNHLHSP 710
           ++  S+G N  +      +   N+S K   GNTS      T   Q   PNH+  P
Sbjct: 127 RLPYSLGTNYGSDGQLFNNCSPNSSGKSTPGNTSVTSEVATPRPQAKSPNHIKRP 181


>U64608-8|AAO91671.1|  316|Caenorhabditis elegans Egg laying
           defective protein 13,isoform b protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +3

Query: 546 KMAASIGANEWAGSNAGASVWKNTSSKHHVGNTSTLPHHDTLSRQLAPPNHLHSP 710
           ++  S+G N  +      +   N+S K   GNTS      T   Q   PNH+  P
Sbjct: 124 RLPYSLGTNYGSDGQLFNNCSPNSSGKSTPGNTSVTSEVATPRPQAKSPNHIKRP 178


>U64608-7|AAX88814.1|  422|Caenorhabditis elegans Egg laying
           defective protein 13,isoform c protein.
          Length = 422

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +3

Query: 546 KMAASIGANEWAGSNAGASVWKNTSSKHHVGNTSTLPHHDTLSRQLAPPNHLHSP 710
           ++  S+G N  +      +   N+S K   GNTS      T   Q   PNH+  P
Sbjct: 230 RLPYSLGTNYGSDGQLFNNCSPNSSGKSTPGNTSVTSEVATPRPQAKSPNHIKRP 284


>U64608-6|AAB04597.2|  470|Caenorhabditis elegans Egg laying
           defective protein 13,isoform a protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +3

Query: 546 KMAASIGANEWAGSNAGASVWKNTSSKHHVGNTSTLPHHDTLSRQLAPPNHLHSP 710
           ++  S+G N  +      +   N+S K   GNTS      T   Q   PNH+  P
Sbjct: 278 RLPYSLGTNYGSDGQLFNNCSPNSSGKSTPGNTSVTSEVATPRPQAKSPNHIKRP 332


>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical protein
            F31D5.5 protein.
          Length = 1788

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +3

Query: 39   YAFTILNSLQGLVIFIFHCLQNDKFRNECAR-LSRRHRW 152
            Y F +L   QG+ +F+    +  + RNE  +  SR  +W
Sbjct: 1737 YIFVLLLGTQGIDLFLIFLYRRQRLRNESRKWSSREEKW 1775


>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
            protein MTH-1 protein.
          Length = 1757

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +3

Query: 39   YAFTILNSLQGLVIFIFHCLQNDKFRNECAR-LSRRHRW 152
            Y F +L   QG+ +F+    +  + RNE  +  SR  +W
Sbjct: 1706 YIFVLLLGTQGIDLFLIFLYRRQRLRNESRKWSSREEKW 1744


>AF097319-1|AAD12252.1|  470|Caenorhabditis elegans Sox domain
           protein COG-2 protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +3

Query: 546 KMAASIGANEWAGSNAGASVWKNTSSKHHVGNTSTLPHHDTLSRQLAPPNHLHSP 710
           ++  S+G N  +      +   N+S K   GNTS      T   Q   PNH+  P
Sbjct: 278 RLPYSLGTNYGSDGQLFNNCSPNSSGKSTPGNTSVTSEVATPRPQAKSPNHIKRP 332


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,880,031
Number of Sequences: 27780
Number of extensions: 478694
Number of successful extensions: 1401
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)