Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1334
         (570 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S80071-1|AAB47007.2|  636|Homo sapiens brain-specific L-proline ...    29   8.7  
BC113425-1|AAI13426.1|  636|Homo sapiens solute carrier family 6...    29   8.7  
BC093785-1|AAH93785.1|  636|Homo sapiens solute carrier family 6...    29   8.7  
BC069631-1|AAH69631.1|  636|Homo sapiens solute carrier family 6...    29   8.7  

>S80071-1|AAB47007.2|  636|Homo sapiens brain-specific L-proline
           transporter protein.
          Length = 636

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 517 NRNALLLHGRNRQGGGTYPCGLTTGPTTSKKYWIKYM 407
           N    L H  ++ G G  P  LT   + S++YW +Y+
Sbjct: 162 NTELCLEHRVSKDGNGALPLNLTCTVSPSEEYWSRYV 198


>BC113425-1|AAI13426.1|  636|Homo sapiens solute carrier family 6
           (neurotransmitter transporter, L-proline), member 7
           protein.
          Length = 636

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 517 NRNALLLHGRNRQGGGTYPCGLTTGPTTSKKYWIKYM 407
           N    L H  ++ G G  P  LT   + S++YW +Y+
Sbjct: 162 NTELCLEHRVSKDGNGALPLNLTCTVSPSEEYWSRYV 198


>BC093785-1|AAH93785.1|  636|Homo sapiens solute carrier family 6
           (neurotransmitter transporter, L-proline), member 7
           protein.
          Length = 636

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 517 NRNALLLHGRNRQGGGTYPCGLTTGPTTSKKYWIKYM 407
           N    L H  ++ G G  P  LT   + S++YW +Y+
Sbjct: 162 NTELCLEHRVSKDGNGALPLNLTCTVSPSEEYWSRYV 198


>BC069631-1|AAH69631.1|  636|Homo sapiens solute carrier family 6
           (neurotransmitter transporter, L-proline), member 7
           protein.
          Length = 636

 Score = 29.5 bits (63), Expect = 8.7
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = -3

Query: 517 NRNALLLHGRNRQGGGTYPCGLTTGPTTSKKYWIKYM 407
           N    L H  ++ G G  P  LT   + S++YW +Y+
Sbjct: 162 NTELCLEHRVSKDGNGALPLNLTCTVSPSEEYWSRYV 198


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,379,022
Number of Sequences: 237096
Number of extensions: 1687134
Number of successful extensions: 2678
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2678
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)