Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1334
         (570 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p pro...    30   2.5  
AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-P...    30   2.5  
AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-P...    30   2.5  

>AY094716-1|AAM11069.1| 1688|Drosophila melanogaster GH16393p protein.
          Length = 1688

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 534  NCPALQTETHYCFTAEIGRVVVPTRA 457
            NC  ++    +CF +  GR+  PTRA
Sbjct: 1418 NCEGVEKRRDFCFNSHKGRIACPTRA 1443


>AE014297-2048|AAF55199.3| 1537|Drosophila melanogaster CG14869-PA,
            isoform A protein.
          Length = 1537

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 534  NCPALQTETHYCFTAEIGRVVVPTRA 457
            NC  ++    +CF +  GR+  PTRA
Sbjct: 1267 NCEGVEKRRDFCFNSHKGRIACPTRA 1292


>AE014297-2047|AAS65157.1| 1688|Drosophila melanogaster CG14869-PB,
            isoform B protein.
          Length = 1688

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 534  NCPALQTETHYCFTAEIGRVVVPTRA 457
            NC  ++    +CF +  GR+  PTRA
Sbjct: 1418 NCEGVEKRRDFCFNSHKGRIACPTRA 1443


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,295,624
Number of Sequences: 53049
Number of extensions: 478685
Number of successful extensions: 1111
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)