Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1333
         (479 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   1.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   1.3  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   1.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   3.9  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   9.1  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 479 DFVPVHVRKQT 447
           DF PVHV KQT
Sbjct: 272 DFQPVHVHKQT 282


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 479 DFVPVHVRKQT 447
           DF PVHV KQT
Sbjct: 272 DFQPVHVHKQT 282


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -1

Query: 479 DFVPVHVRKQTETKSLTIARVGESVDRDXRLRGVERLP-DPGVQLVVADAAPE 324
           + +P +++ +  T+   ++RVG    R   L  VER P  P     +  AA E
Sbjct: 184 EVMPYYLKSENNTE---LSRVGTKYHRSGGLMNVERFPYQPPFAWKILKAAEE 233


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 146 HVLCKCSLEIQCAVSCTRLHGN 81
           H+L K +L +   V C + +GN
Sbjct: 308 HILQKTTLNMLTQVECYKYYGN 329


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 138 VQV*PRDTVRCVLYQTAWQRQG 73
           V+  P D  RCVL   +W   G
Sbjct: 135 VEFFPFDEQRCVLKWASWTYDG 156


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,841
Number of Sequences: 438
Number of extensions: 2235
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)