Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1330
(772 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813... 46 4e-05
06_03_0968 - 26402154-26403834,26404322-26404383,26404473-264046... 43 3e-04
08_02_1014 - 23586552-23587224,23587402-23587463,23587735-235879... 41 0.001
02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942 38 0.007
01_06_1840 - 40250285-40251022,40251121-40251283,40251523-40251731 38 0.007
01_05_0451 - 22361617-22361811,22362728-22362842,22363443-223635... 38 0.007
03_02_0701 - 10523053-10523220,10523802-10523916,10524102-105241... 38 0.009
04_03_0710 - 18916593-18917372,18917467-18917629,18917715-18917959 37 0.020
02_05_0984 + 33320080-33320140,33320219-33320404,33320771-333210... 32 0.44
10_07_0119 + 13042477-13042864,13044114-13044259,13046104-13046697 32 0.58
04_04_1245 - 32036929-32037042,32037152-32037208,32037299-320373... 32 0.58
03_05_0841 - 28104977-28105142,28105439-28105502,28105586-281056... 31 0.77
10_02_0137 - 5730778-5730873,5732137-5732334,5732413-5732625,573... 30 2.4
02_01_0174 - 1193696-1193726,1193822-1194175,1194307-1194542,119... 30 2.4
01_01_0990 + 7847066-7847478,7847713-7848679 29 3.1
09_04_0636 + 19150966-19151037,19151150-19151291,19151404-191514... 29 4.1
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 28 7.2
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 28 7.2
04_03_0517 + 16712487-16712570,16713715-16714059,16714149-167143... 28 7.2
04_03_0181 - 12327281-12328620,12330922-12331015,12331079-123311... 28 7.2
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 28 9.5
10_06_0175 - 11490280-11491000,11491869-11491947,11493613-114938... 28 9.5
05_01_0290 + 2270749-2271037,2272227-2272363,2272660-2272805,227... 28 9.5
>02_02_0236 +
8135641-8135795,8136167-8136557,8136640-8136931,
8137117-8137271,8137363-8137451,8137623-8137967,
8139046-8139169,8139424-8139581,8139673-8139757,
8140094-8140306,8141314-8141375,8141466-8141951,
8142472-8142568
Length = 883
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/39 (43%), Positives = 19/39 (48%)
Frame = +3
Query: 564 QCVKCGAPADWYCSRCAITPYCSQTCQTRDWTERHKSVC 680
+C C PA CSRC YCS CQ W + HK C
Sbjct: 31 ECATCHGPAKTRCSRCKSVRYCSGKCQIIHWRQGHKQTC 69
>06_03_0968 -
26402154-26403834,26404322-26404383,26404473-26404682,
26404776-26404860,26405461-26405618,26405745-26405868,
26405955-26406123,26406202-26406287,26406379-26406467,
26406564-26406735,26407820-26408193
Length = 1069
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 567 CVKCGAPADWYCSRCAITPYCSQTCQTRDWTERHKSVCHYL---APL-KTAGGFEAE 725
C CG A CS C YCSQ CQ++ W HK C + +P K +GG E +
Sbjct: 105 CAACGYIATKKCSGCKRVRYCSQGCQSKHWQSGHKFKCKQMKKSSPADKLSGGGEED 161
>08_02_1014 -
23586552-23587224,23587402-23587463,23587735-23587950,
23588125-23588209,23589232-23589389,23589505-23589625,
23590081-23590243,23590330-23590415,23590660-23590742,
23590816-23591677,23593266-23593693
Length = 978
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 567 CVKCGAPADWYCSRCAITPYCSQTCQTRDWTERHKSVC 680
C C P + C +C YCS CQ W + HK+ C
Sbjct: 123 CAVCFRPTTFRCKQCKAVKYCSFKCQIAHWRQGHKNEC 160
>02_03_0361 - 18125504-18126250,18126381-18126543,18126713-18126942
Length = 379
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +3
Query: 600 CSRCAITPYCSQTCQTRDWTERHKSVC----HYLAPLKTAGGFEAEATSSKSVSNSTP 761
CS C+ YCS+ CQ W HKS C H+L G A ++ + + P
Sbjct: 322 CSVCSGVIYCSRACQAMHWKVAHKSACVPMAHWLVAANAGAGNAVGAAAAAAAQMAMP 379
>01_06_1840 - 40250285-40251022,40251121-40251283,40251523-40251731
Length = 369
Score = 38.3 bits (85), Expect = 0.007
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 600 CSRCAITPYCSQTCQTRDWTERHKSVC 680
CS C YCS+ CQ DW HK+ C
Sbjct: 329 CSVCGAANYCSRACQALDWKRAHKAQC 355
>01_05_0451 -
22361617-22361811,22362728-22362842,22363443-22363513,
22363600-22363754,22363843-22363933,22364049-22364104,
22364910-22365027,22365087-22365200,22365289-22365504
Length = 376
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 600 CSRCAITPYCSQTCQTRDWTERHKSVCHYLAPLKTAGGFEAEA 728
CSRC + YCS+ Q W +HK+ CH ++ A +A
Sbjct: 154 CSRCRKSSYCSKKHQELHWRAKHKNECHQISGSHNASAIMPDA 196
>03_02_0701 -
10523053-10523220,10523802-10523916,10524102-10524172,
10524263-10524420,10524497-10524590,10524678-10524766,
10525322-10525419,10525492-10525625,10525714-10525797,
10525903-10526151
Length = 419
Score = 37.9 bits (84), Expect = 0.009
Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = +3
Query: 567 CVKCGA-PADWYCSRCAITPYCSQTCQTRDWTERHKSVCHYLAPLKTAGGFEAEATSSKS 743
C CG D CS C YCS+ QT W HKS C L A A
Sbjct: 192 CHWCGTWKGDKLCSSCKKARYCSEKHQTLHWRSGHKSDCLQLISSSEASSSIFPAVGKVP 251
Query: 744 VSNSTP 761
S S P
Sbjct: 252 ASKSWP 257
>04_03_0710 - 18916593-18917372,18917467-18917629,18917715-18917959
Length = 395
Score = 36.7 bits (81), Expect = 0.020
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 600 CSRCAITPYCSQTCQTRDWTERHKSVC 680
CS C + YCS+ CQ W HK+ C
Sbjct: 342 CSVCGVVNYCSRACQALHWKTAHKAEC 368
>02_05_0984 +
33320080-33320140,33320219-33320404,33320771-33321028,
33321147-33321625
Length = 327
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 549 RNASRQCVKCGAPADWYCSRCAITPYCSQTCQTRDWTERHK 671
R +S +C C PADW S C++ CS C + ++HK
Sbjct: 183 RPSSPKCCSCDRPADWITSCCSLM-LCSY-CMPDKFHQKHK 221
>10_07_0119 + 13042477-13042864,13044114-13044259,13046104-13046697
Length = 375
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +3
Query: 555 ASRQCVKCGAPADWYCSRCA-ITPYCSQTC 641
A C CGAP W C+RC + P S C
Sbjct: 34 AGSPCGSCGAPPPWACARCTLLNPSGSGVC 63
>04_04_1245 -
32036929-32037042,32037152-32037208,32037299-32037375,
32037479-32037563,32037615-32037684,32038007-32038068,
32038249-32038336,32038685-32038815,32039182-32039213,
32039377-32039489,32039741-32040045,32040148-32040233,
32040350-32040425,32041002-32041097
Length = 463
Score = 31.9 bits (69), Expect = 0.58
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 600 CSRCAITPYCSQTCQTRDWTERHKSVC 680
C C YCSQ+C DW H +C
Sbjct: 178 CRGCEEERYCSQSCADSDWETYHSLLC 204
>03_05_0841 -
28104977-28105142,28105439-28105502,28105586-28105655,
28105743-28105852,28106217-28106295,28106610-28106691,
28106791-28106879,28107351-28107425,28107728-28107862,
28108018-28108163,28108380-28108491
Length = 375
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +3
Query: 600 CSRCAITPYCSQTCQTRDWTERHKSVCHYLAPL 698
CS C + YC CQ +W + H+ C +A L
Sbjct: 72 CSVCRVAWYCGSACQREEW-KLHQLECRAIAAL 103
>10_02_0137 -
5730778-5730873,5732137-5732334,5732413-5732625,
5732748-5732870,5733726-5733841,5734530-5734897,
5735498-5735649,5736557-5736715,5737773-5737946
Length = 532
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 567 CVKCGAPADWYCSRCAITPYCSQTCQTRDWTERHKSVCHY-LAPLKTAGGFEAEATSSKS 743
C CG+P+D Y + C T CS ++ + VC + L A AT+ KS
Sbjct: 12 CEGCGSPSDLYGTSCKHTTLCSSCGKSMALSGARCLVCSAPITNLIREYNVRANATTDKS 71
Query: 744 VS 749
S
Sbjct: 72 FS 73
>02_01_0174 -
1193696-1193726,1193822-1194175,1194307-1194542,
1194629-1194741,1195963-1196161,1196427-1196513
Length = 339
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 6 FAIVQFETASEAKLAMMKMNGSEPLNLKISIAHKTIRKTQHDNKDRNYSTSRNG 167
FA VQ+E +A A+ NGS ++ IS+ + +R D K YS R G
Sbjct: 191 FAFVQYELQEDATKALEGTNGSTLMDRVISVEY-ALR--DDDEKRNGYSPERRG 241
>01_01_0990 + 7847066-7847478,7847713-7848679
Length = 459
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Frame = -1
Query: 493 TSAESVSLALFLTTMRPSGRTDLPADECG---ATCLFSACRRSNLRL 362
TS ++ L +P G T PADECG LF+A N L
Sbjct: 354 TSTAAMPLVSPFEPTKPGGATASPADECGKFDGAALFAAASHHNANL 400
>09_04_0636 +
19150966-19151037,19151150-19151291,19151404-19151492,
19151589-19152308
Length = 340
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 118 KRNMTIKTGITARHEMVIVVEMKHPVSAARDG 213
K +M + G+ A ++ V+E +HP+S A +G
Sbjct: 288 KEDMELVAGMVAEGKLRAVIESRHPLSRAEEG 319
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = +3
Query: 474 ETDSAEVEPSFAGAGSESLKTPGLERNASRQCVK--CGAPADWYCSRCAITPYCSQTCQT 647
E + E E A E E A+ VK C ++ C R + + CQ
Sbjct: 82 EDEEEEEEEEAAAVELEMPAARQAEAAAAAAAVKGVCVISYNFLCMRILLFDSDTFKCQI 141
Query: 648 RDWTERHKSVCH 683
W + HK CH
Sbjct: 142 SHWRQGHKDECH 153
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 87 KISIAHKTIRKTQHDNKDRNYSTSRNGHCSRDEASSISSKG 209
K+S A K ++KT+HD++ +Y + G + A SSKG
Sbjct: 3885 KVSQAVKGLQKTRHDSQKSDYLVLKYGLRWKRRACRKSSKG 3925
>04_03_0517 + 16712487-16712570,16713715-16714059,16714149-16714301,
16714889-16714972,16715426-16715479,16715552-16715647,
16716163-16716258,16716941-16717086,16717650-16717799,
16717889-16718018,16718128-16718787,16718881-16718979,
16719058-16719210,16719323-16720054,16720338-16720640
Length = 1094
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -1
Query: 601 QYQSAGAPHFTHWREAFRSSPGVFSDSEPAPAN 503
+Y +AG+P WRE F G F S+ N
Sbjct: 1051 KYDTAGSPGDQQWREEFNQQGGSFEVSKSTDLN 1083
>04_03_0181 -
12327281-12328620,12330922-12331015,12331079-12331183,
12331404-12332592,12333268-12333461
Length = 973
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +3
Query: 381 RHAEKRQVAPHSSAGRSVLPDGRIVVRNNANETDSAEVEPSFAGAGSESLKTPGLERNAS 560
+ AE SS RS P + +A + E EPS SES+ TP +E +
Sbjct: 278 KRAESANGGSASSKARSGAPQRAMAA--SATSKEEKEDEPSMQFEESESISTPSIEDHLH 335
Query: 561 RQ 566
Q
Sbjct: 336 EQ 337
>10_08_0747 -
20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 6 FAIVQFETASEAKLAMMKMNG 68
+A VQ+ T EA+LA KMNG
Sbjct: 915 YAFVQYTTKEEAQLAKEKMNG 935
>10_06_0175 -
11490280-11491000,11491869-11491947,11493613-11493811,
11494003-11494044
Length = 346
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +1
Query: 391 RRDRWLRIRLPVD-PSCPTVA 450
RRD+WLR + P D PS PT A
Sbjct: 304 RRDQWLRQQCPRDAPSSPTAA 324
>05_01_0290 +
2270749-2271037,2272227-2272363,2272660-2272805,
2272853-2272877
Length = 198
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = +3
Query: 6 FAIVQFETASEAKLAMMKMNGSEPLNLKISI 98
+A++++ET EA+ A+ ++G+E L IS+
Sbjct: 144 YALIEYETFEEAQAAIKALDGTELLTQIISV 174
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,090,723
Number of Sequences: 37544
Number of extensions: 345953
Number of successful extensions: 1218
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1218
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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