Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1327
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031073-1|AAH31073.1|  232|Homo sapiens PARP11 protein protein.       32   2.4  
BC017569-1|AAH17569.1|  331|Homo sapiens poly (ADP-ribose) polym...    32   2.4  
AF263540-1|AAF91391.1|  331|Homo sapiens MIB006 protein.               32   2.4  
CR457363-1|CAG33644.1|  308|Homo sapiens SLC12A8 protein.              31   5.5  

>BC031073-1|AAH31073.1|  232|Homo sapiens PARP11 protein protein.
          Length = 232

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +2

Query: 314 LSTGKLPLSLRSQFFIITRSYIIHEQSHITYPRHWEDQRSPFCW-FMNNHLHAHSYPRIA 490
           L+TGK  L  R+ F I   SYI  E   I  P HWE+  +   +  +  H   H Y  +A
Sbjct: 89  LTTGKQRLIKRAPFSISAFSYIC-ENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVA 147


>BC017569-1|AAH17569.1|  331|Homo sapiens poly (ADP-ribose)
           polymerase family, member 11 protein.
          Length = 331

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +2

Query: 314 LSTGKLPLSLRSQFFIITRSYIIHEQSHITYPRHWEDQRSPFCW-FMNNHLHAHSYPRIA 490
           L+TGK  L  R+ F I   SYI  E   I  P HWE+  +   +  +  H   H Y  +A
Sbjct: 89  LTTGKQRLIKRAPFSISAFSYIC-ENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVA 147


>AF263540-1|AAF91391.1|  331|Homo sapiens MIB006 protein.
          Length = 331

 Score = 31.9 bits (69), Expect = 2.4
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +2

Query: 314 LSTGKLPLSLRSQFFIITRSYIIHEQSHITYPRHWEDQRSPFCW-FMNNHLHAHSYPRIA 490
           L+TGK  L  R+ F I   SYI  E   I  P HWE+  +   +  +  H   H Y  +A
Sbjct: 89  LTTGKQRLIKRAPFSISAFSYIC-ENEAIPMPPHWENVNTQVPYQLIPLHNQTHEYNEVA 147


>CR457363-1|CAG33644.1|  308|Homo sapiens SLC12A8 protein.
          Length = 308

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 461 LHAHSYPRIAPCPENESVGPAKR-CESVLRDKTKSDLNALQLKFRLEKS 604
           LH   +P +   P   S GPA+R  E  L + TK     LQL  +LE S
Sbjct: 21  LHCSEHPLLEKAPSYGSEGPAQRVLEGTLLEFTKDMDQLLQLTRKLESS 69


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,116,809
Number of Sequences: 237096
Number of extensions: 1625713
Number of successful extensions: 2716
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2716
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)