Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1324
         (793 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    27   0.15 
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    27   0.15 
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   4.3  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   5.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   7.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   7.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   9.9  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 43  FNMAEPNSDNIVKNTENEYSTPASDPKNMQEVTQYVQSLLQNMQDK 180
           FN +E   ++ + +TE  YS       N Q+ TQY+     N+Q+K
Sbjct: 369 FNESENRRNSCLGSTETYYSK-----HNTQQFTQYIPESSSNLQEK 409


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 27.5 bits (58), Expect = 0.15
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -2

Query: 336 DILTQIDR*KLFLLFIFNTSLCHKICNILFQFINSASHFIN 214
           D LT  +  ++F+  IF  S C  +  I++ +    SH +N
Sbjct: 200 DYLTDTNEIRIFVATIFTFSYCIPMILIIYYYSQIVSHVVN 240


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
          precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 96 FIFCVFNNIVRVRFCHIKENKI 31
          FIF  FN++VR R   I+ +K+
Sbjct: 22 FIFLYFNSLVRFRRFTIELDKV 43


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 705 FQCC*TPVFKIDVVVL*ISIMLYYLF 782
           + CC  P   I  VV+     LYY F
Sbjct: 211 YNCCPEPYIDITFVVIIRRRTLYYFF 236


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 43  FNMAEPNSDNIVKNTENEYSTPASDP 120
           +N    N +N++ +    YST   DP
Sbjct: 393 YNFDFQNKNNLIPSALQSYSTSMRDP 418


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 43  FNMAEPNSDNIVKNTENEYSTPASDP 120
           +N    N +N++ +    YST   DP
Sbjct: 393 YNFDFQNKNNLIPSALQSYSTSMRDP 418


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -2

Query: 66  RVRFCHIKENKIYSNV 19
           R+++   KEN++Y+N+
Sbjct: 329 RIQYAQHKENELYANL 344


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -2

Query: 66  RVRFCHIKENKIYSNV 19
           R+++   KEN++Y+N+
Sbjct: 367 RIQYAQHKENELYANL 382


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = -3

Query: 749 NYNIYFKYW 723
           NY +Y++YW
Sbjct: 566 NYKLYWRYW 574


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,202
Number of Sequences: 438
Number of extensions: 4684
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)