Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1322
         (562 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   2.2  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    23   6.8  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   9.0  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 444 YLKVCGAFALWMSMGSSNHLTPGG 515
           Y K+CG+     S  S N L+PGG
Sbjct: 165 YQKICGSNIPQASGHSKNSLSPGG 188



 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -2

Query: 399  QTETHHCFTAETGGAVAPTRADSQEVLPPVI 307
            Q ET  C+T+      +   ++ QEV P  +
Sbjct: 1179 QNETLSCYTSRRNSTTSNANSEPQEVAPQFV 1209


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -2

Query: 444 IVLRSQYSHNGCPALQTETHHCFTAETGGAVAPTRADSQEV 322
           ++++ Q   +G P L+TE H    A  G A+A  +A+  ++
Sbjct: 432 LLMQLQADLSGIPVLRTEVHE--PAALGTAMAAAQANGVDL 470


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -1

Query: 514 PPGVKWLLEPIDIHNANAPHTLRYSSKVSV 425
           PP   W  + +  +NA+  + +RY S V +
Sbjct: 104 PPDKVWKPDIVLFNNADGNYEVRYKSNVLI 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,255
Number of Sequences: 2352
Number of extensions: 12988
Number of successful extensions: 38
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)