Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1317
         (804 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81588-3|CAB04715.2|  377|Caenorhabditis elegans Hypothetical pr...    31   0.73 
AL031624-2|CAA20942.1|  244|Caenorhabditis elegans Hypothetical ...    31   0.73 
AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical ...    29   3.9  

>Z81588-3|CAB04715.2|  377|Caenorhabditis elegans Hypothetical
           protein T07D10.3 protein.
          Length = 377

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 769 LLFLNLVEARLHQLLSYDQCQ 707
           LLFL+L++AR H LL +  CQ
Sbjct: 97  LLFLDLIDARFHYLLEHQSCQ 117


>AL031624-2|CAA20942.1|  244|Caenorhabditis elegans Hypothetical
           protein H16D19.3 protein.
          Length = 244

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 769 LLFLNLVEARLHQLLSYDQCQ 707
           LLFL+L++AR H LL +  CQ
Sbjct: 85  LLFLDLIDARFHYLLEHQSCQ 105


>AL117200-4|CAB60584.1|  401|Caenorhabditis elegans Hypothetical
           protein Y50E8A.7 protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -1

Query: 717 INANSTIQHYGHTNDNHQSSIESSHTI-I*YITFGKDVNHLSDEKIFLC*VRPWFVF 550
           ++A  TI HYG+T + H  + +  +T+ +  I  G+D     D  I  C  RP   F
Sbjct: 23  LDAADTISHYGYTVEKHYVTTDDGYTVQLQRIPVGRD-----DRSILGCSKRPVVFF 74


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,219,934
Number of Sequences: 27780
Number of extensions: 340498
Number of successful extensions: 585
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)