Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1314
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm (li... 132 2e-31
Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical p... 45 5e-05
Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical p... 45 5e-05
AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication l... 45 5e-05
Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical pr... 39 0.004
AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical ... 37 0.012
AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm (l... 31 1.1
AF016452-15|AAX88811.1| 349|Caenorhabditis elegans Hypothetical... 30 1.8
AF016452-14|AAB66020.1| 409|Caenorhabditis elegans Hypothetical... 30 1.8
Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical p... 29 2.4
Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical pr... 29 2.4
U80952-3|AAB38093.1| 279|Caenorhabditis elegans Hypothetical pr... 29 4.3
L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome bet... 29 4.3
AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome co... 29 4.3
AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical ... 29 4.3
Z81132-14|CAB03432.3| 378|Caenorhabditis elegans Hypothetical p... 28 5.6
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 28 5.6
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 28 5.6
AC006730-7|AAF60473.1| 487|Caenorhabditis elegans Hypothetical ... 28 5.6
Z81470-3|CAB03880.1| 401|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 28 7.4
U53339-4|AAA96200.1| 298|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z93388-14|CAN86927.1| 226|Caenorhabditis elegans Hypothetical p... 27 9.8
Z93388-13|CAB07666.1| 383|Caenorhabditis elegans Hypothetical p... 27 9.8
AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical ... 27 9.8
>AF016427-3|AAB65356.1| 730|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 7 protein.
Length = 730
Score = 132 bits (319), Expect = 2e-31
Identities = 62/156 (39%), Positives = 96/156 (61%), Gaps = 4/156 (2%)
Frame = +3
Query: 228 DLTEAVKQNTRRYTNMVSDVVYEMLPDYKF-KEVVAKDSLDVYIEHRIMLEARNHRIPGE 404
+L+EA+ NT+RY + D + +M+ DY K+ D+LD Y+ R+ ++ RN E
Sbjct: 70 ELSEAITSNTKRYEVLFKDTISDMIQDYLGDKQAPVIDALDAYMFQRLHMD-RNEGAANE 128
Query: 405 ---MRDPRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKP 575
++D R +YPP+L++RFEVYF + +R +KA IG LV+++G+V R T+VKP
Sbjct: 129 EVSLQDKRKKYPPQLLQRFEVYFTTDDAAHETCVRNIKATEIGHLVSMKGVVIRATEVKP 188
Query: 576 LLVVATYSCSACGAETYQPVRALQLTPTSACTDDDC 683
+ V TY+C C AE YQPV+ +Q TP C + +C
Sbjct: 189 CVEVMTYTCDTCAAEVYQPVKGMQFTPPVNCPNKEC 224
>Z29095-13|CAA82357.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 45.2 bits (102), Expect = 5e-05
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Frame = +3
Query: 309 YKFKEVVAKD-SLDVYIEHRIMLEARNHRIPGEMRDPRNRYPPELIRRFEVYFKDLSTSK 485
YKF +A L Y + M EA H + D R ++ ++ ++Y +
Sbjct: 63 YKFSNNLATTIELQYYRVYPFMCEAL-HLATLDACDESERQ--QMFKK-QLYVSLFNLDA 118
Query: 486 SVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVRALQLTPTSA 665
+RE+ A+ +G LV + G + R V P L A + C CG T + + T +
Sbjct: 119 KTKVRELSADKVGGLVRIAGQIVRTHPVHPELSRACFVCEDCGVTTRDVQQQFRYTQPTK 178
Query: 666 CTDDDCRLNKT 698
C + C +N+T
Sbjct: 179 CANPQC-MNRT 188
>Z22181-15|CAA80191.1| 810|Caenorhabditis elegans Hypothetical
protein ZK632.1a protein.
Length = 810
Score = 45.2 bits (102), Expect = 5e-05
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Frame = +3
Query: 309 YKFKEVVAKD-SLDVYIEHRIMLEARNHRIPGEMRDPRNRYPPELIRRFEVYFKDLSTSK 485
YKF +A L Y + M EA H + D R ++ ++ ++Y +
Sbjct: 63 YKFSNNLATTIELQYYRVYPFMCEAL-HLATLDACDESERQ--QMFKK-QLYVSLFNLDA 118
Query: 486 SVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVRALQLTPTSA 665
+RE+ A+ +G LV + G + R V P L A + C CG T + + T +
Sbjct: 119 KTKVRELSADKVGGLVRIAGQIVRTHPVHPELSRACFVCEDCGVTTRDVQQQFRYTQPTK 178
Query: 666 CTDDDCRLNKT 698
C + C +N+T
Sbjct: 179 CANPQC-MNRT 188
>AF326940-1|AAG49390.1| 810|Caenorhabditis elegans replication
licensing factor MCM2/3/5-type protein protein.
Length = 810
Score = 45.2 bits (102), Expect = 5e-05
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Frame = +3
Query: 309 YKFKEVVAKD-SLDVYIEHRIMLEARNHRIPGEMRDPRNRYPPELIRRFEVYFKDLSTSK 485
YKF +A L Y + M EA H + D R ++ ++ ++Y +
Sbjct: 63 YKFSNNLATTIELQYYRVYPFMCEAL-HLATLDACDESERQ--QMFKK-QLYVSLFNLDA 118
Query: 486 SVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPVRALQLTPTSA 665
+RE+ A+ +G LV + G + R V P L A + C CG T + + T +
Sbjct: 119 KTKVRELSADKVGGLVRIAGQIVRTHPVHPELSRACFVCEDCGVTTRDVQQQFRYTQPTK 178
Query: 666 CTDDDCRLNKT 698
C + C +N+T
Sbjct: 179 CANPQC-MNRT 188
>Z81039-5|CAB02770.1| 812|Caenorhabditis elegans Hypothetical
protein C25D7.6 protein.
Length = 812
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +3
Query: 450 FEVYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSA 608
F V F+ + V R +K+ ++G LV GIVT+C+ V+ L+ + + C A
Sbjct: 103 FHVGFEGTFGERHVNPRTLKSSYLGNLVCCEGIVTKCSTVRQKLLTSVHYCPA 155
>AL023828-7|CAA19452.1| 881|Caenorhabditis elegans Hypothetical
protein Y17G7B.5a protein.
Length = 881
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 495 IREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACG 614
IR ++ H+ L+ G+VT + + P L V Y C ACG
Sbjct: 270 IRMLRQVHLNMLIRTAGVVTIASGILPQLAVVKYDCVACG 309
>AC025716-11|AAK39605.1| 823|Caenorhabditis elegans Yeast mcm
(licensing factor) relatedprotein 4 protein.
Length = 823
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/73 (19%), Positives = 33/73 (45%)
Frame = +3
Query: 456 VYFKDLSTSKSVPIREVKAEHIGKLVTVRGIVTRCTDVKPLLVVATYSCSACGAETYQPV 635
+ + + K+ +R + + +L+T+ G+VTR + + P + + C+ C V
Sbjct: 221 IELRPFNAQKTRNMRGLNPNDVDQLITISGMVTRTSSLIPEMRSGYFQCAVCAFGIESEV 280
Query: 636 RALQLTPTSACTD 674
++ CT+
Sbjct: 281 DKGRIEEPVVCTN 293
>AF016452-15|AAX88811.1| 349|Caenorhabditis elegans Hypothetical
protein T05H4.15c protein.
Length = 349
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +3
Query: 177 EQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMVSDVVYEMLPDYKFKEVVAKD 338
EQ++F + D L EM++D+++ TRR T DV+ +++ ++ V+ +D
Sbjct: 8 EQLSFGLFGDLLDEMHQDISDQPTLATRRATQKEFDVLCKLIGGFEKWSVLNED 61
>AF016452-14|AAB66020.1| 409|Caenorhabditis elegans Hypothetical
protein T05H4.15a protein.
Length = 409
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +3
Query: 177 EQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMVSDVVYEMLPDYKFKEVVAKD 338
EQ++F + D L EM++D+++ TRR T DV+ +++ ++ V+ +D
Sbjct: 8 EQLSFGLFGDLLDEMHQDISDQPTLATRRATQKEFDVLCKLIGGFEKWSVLNED 61
>Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical
protein F36G9.1 protein.
Length = 356
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -3
Query: 577 SGFTSVHRVTIPRTVTSFPICSALTSLIGTLFDVDKSL-KYTSNLLISSGGYLFLGSLIS 401
S F SVH +TIPR +C + + + + L + NL SS G L +
Sbjct: 115 SFFVSVHSITIPRIFQKLAVCFGVAMAVLRVIILKYPLNRRGQNLKRSSSGICILLIVCI 174
Query: 400 PGI-LWF 383
P I WF
Sbjct: 175 PHIPFWF 181
>Z47069-1|CAA87338.1| 964|Caenorhabditis elegans Hypothetical
protein F36G3.1 protein.
Length = 964
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Frame = +3
Query: 225 EDLTEAVKQ-NTRRYTNMVSDVVYEMLPDYKFKEVVAKDSLDVYIEHRIMLEARNHRIPG 401
+DL E VK + + N V + YE LPD + +AK + V E+ I ++ ++
Sbjct: 410 KDLNENVKAFDAEHHENSVLE--YEQLPDVFSEITIAKTPIPVVHENSISGVSKESQVSF 467
Query: 402 EMRDPRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHI 521
+N P I EV + ++P + +
Sbjct: 468 NQEAVQNELMPTHIISDEVETSSTTADNNIPFSDCSTHKV 507
>U80952-3|AAB38093.1| 279|Caenorhabditis elegans Hypothetical
protein F54H5.3 protein.
Length = 279
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 186 AFEVDLDDLHEMNEDLTEAVKQNTRRYTNMV 278
A EVDLD ++ +L+E VK+ +Y+N+V
Sbjct: 226 AVEVDLDRQAQLVNELSERVKRGEIQYSNLV 256
>L14745-10|AAK71356.1| 258|Caenorhabditis elegans Proteasome beta
subunit protein 6 protein.
Length = 258
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -1
Query: 237 QSNLHSSHVNHPSQLQMLSVLLCATLVSCSAYLKYFFP 124
QS LH ++ S + SV LCA L+S + Y + FFP
Sbjct: 112 QSRLHKYRFDYRSDM---SVDLCAELLSRNLYYRRFFP 146
>AF303265-1|AAG50223.1| 258|Caenorhabditis elegans proteasome
component C5 protein.
Length = 258
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -1
Query: 237 QSNLHSSHVNHPSQLQMLSVLLCATLVSCSAYLKYFFP 124
QS LH ++ S + SV LCA L+S + Y + FFP
Sbjct: 112 QSRLHKYRFDYRSDM---SVDLCAELLSRNLYYRRFFP 146
>AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical
protein C09E8.1a protein.
Length = 783
Score = 28.7 bits (61), Expect = 4.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +1
Query: 253 IPEDTLIWCQTWFMKCCLIT 312
+P +I C TW CC++T
Sbjct: 711 VPPLLIIMCNTWIRSCCIVT 730
>Z81132-14|CAB03432.3| 378|Caenorhabditis elegans Hypothetical
protein T26E4.3 protein.
Length = 378
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 204 DDLHEMNEDLTEAVKQNTRRYT 269
DDL+ +NE T+++K NT YT
Sbjct: 272 DDLNFVNEVFTQSIKSNTSSYT 293
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +3
Query: 72 IKNLSRTFSWIFVKLMMKEKSILNMLNNLLKLHTAEQIAFEVDLDDLHEMNEDLTEAVKQ 251
I + + F IF ++ + + + L+ H A Q + HE E E K+
Sbjct: 853 INSNNEAFHRIFTQVTSENGVVAESVKKLVTQHAANQQDMMTKVTKAHEALELAAEDRKK 912
Query: 252 NTRRY 266
N RRY
Sbjct: 913 NERRY 917
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +3
Query: 72 IKNLSRTFSWIFVKLMMKEKSILNMLNNLLKLHTAEQIAFEVDLDDLHEMNEDLTEAVKQ 251
I + + F IF ++ + + + L+ H A Q + HE E E K+
Sbjct: 853 INSNNEAFHRIFTQVTSENGVVAESVKKLVTQHAANQQDMMTKVTKAHEALELAAEDRKK 912
Query: 252 NTRRY 266
N RRY
Sbjct: 913 NERRY 917
>AC006730-7|AAF60473.1| 487|Caenorhabditis elegans Hypothetical
protein Y27F2A.6 protein.
Length = 487
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 156 LLKLHTAEQIAFEVDLDDLHEMNEDLTEAVKQNTRRYTNMVSDV--VYEMLPDYKF 317
L KL E VDL D+ E +++L A + Y N V + +Y+ PD KF
Sbjct: 93 LEKLSILEPSGSFVDLTDVAENSKNLIFASAASDDHYQNEVGTISAIYKYYPDAKF 148
>Z81470-3|CAB03880.1| 401|Caenorhabditis elegans Hypothetical
protein C14A6.3 protein.
Length = 401
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 66 LQIKNLSRTFSWIFVKLMMKEKSILNMLNNLLKLHTAEQIAFEVDLDDLHEMNEDLTEAV 245
L++++++ +FV L +LNML+N E+I ++ +D+ ++ D V
Sbjct: 263 LELRDIASDTDKLFVLLKTNSIQLLNMLSNATIQGFYEEIIGIINPEDMKDI--DQARKV 320
Query: 246 KQNTRRYTN-----MVSDVVYEML 302
+ +Y N +DVVY L
Sbjct: 321 AEEILKYPNYQELIQFNDVVYNKL 344
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 21 YSNNIFLTKWQCVITLQIKNLSRTFSWIFVKLMMKE-KSILNMLNNLLKLHTAEQIAFEV 197
++ IFL W +T I + T WI + + + S + +L H A+ IA +V
Sbjct: 401 FNEKIFLFLWFWFLTCGIVTVCNTMYWILIMFIPSQGMSFVRKYLRVLPDHPAKPIADDV 460
Query: 198 DL 203
L
Sbjct: 461 TL 462
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +3
Query: 21 YSNNIFLTKWQCVITLQIKNLSRTFSWIFVKLMMKE-KSILNMLNNLLKLHTAEQIAFEV 197
++ IFL W +T I + T WI + + + S + +L H A+ IA +V
Sbjct: 401 FNEKIFLFLWFWFLTCGIVTVCNTMYWILIMFIPSQGMSFVRKYLRVLPDHPAKPIADDV 460
Query: 198 DL 203
L
Sbjct: 461 TL 462
>U53339-4|AAA96200.1| 298|Caenorhabditis elegans Hypothetical
protein F58A6.5 protein.
Length = 298
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 12/64 (18%)
Frame = +3
Query: 198 DLDDLHEMNEDLTEAVKQNTRRYTNMVSDVVYEM------LPDY------KFKEVVAKDS 341
D D+ +E ED+T AVK T+++ DV+ L +Y KF E V + +
Sbjct: 4 DADNGYERLEDITNAVKNEGTEVTHVLRDVIRNYSDLGHDLQEYYDKNLRKFPETVERTA 63
Query: 342 LDVY 353
DVY
Sbjct: 64 NDVY 67
>Z93388-14|CAN86927.1| 226|Caenorhabditis elegans Hypothetical
protein T10C6.10b protein.
Length = 226
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 414 PRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHIGKLVTV 539
P+NR PP + F + K S + + + E+ A HI +L V
Sbjct: 10 PKNRRPPPELIPFSQFLKLPSKALRIVLHELDAHHIFELSQV 51
>Z93388-13|CAB07666.1| 383|Caenorhabditis elegans Hypothetical
protein T10C6.10a protein.
Length = 383
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +3
Query: 414 PRNRYPPELIRRFEVYFKDLSTSKSVPIREVKAEHIGKLVTV 539
P+NR PP + F + K S + + + E+ A HI +L V
Sbjct: 10 PKNRRPPPELIPFSQFLKLPSKALRIVLHELDAHHIFELSQV 51
>AC084152-1|AAM69074.2| 332|Caenorhabditis elegans Hypothetical
protein Y102A11A.9 protein.
Length = 332
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/77 (19%), Positives = 35/77 (45%)
Frame = +3
Query: 60 ITLQIKNLSRTFSWIFVKLMMKEKSILNMLNNLLKLHTAEQIAFEVDLDDLHEMNEDLTE 239
+ L++K + ++ + K K + + N K + + LD L + EDL+E
Sbjct: 214 LKLKLKEVKNNYASMLEKNKKKGEEFIKQSENS-KAVVEKTVQISTVLDSLQKEREDLSE 272
Query: 240 AVKQNTRRYTNMVSDVV 290
K+N ++ + +++
Sbjct: 273 IRKKNEQKIEGLSQELI 289
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,300,481
Number of Sequences: 27780
Number of extensions: 309947
Number of successful extensions: 964
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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