Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1308
         (755 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0481 - 3621798-3621926,3622572-3622660,3622780-3622933,362...    33   0.19 
05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960           33   0.19 
03_06_0260 - 32717142-32717270,32717743-32717831,32717950-327180...    33   0.19 

>07_01_0481 -
           3621798-3621926,3622572-3622660,3622780-3622933,
           3624104-3624111,3625522-3625547,3625757-3625881
          Length = 176

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +2

Query: 5   AAQLYKENRREYEKRVKACVEQSF 76
           AA+L+ EN+REY ++V+  VEQS+
Sbjct: 150 AARLFSENKREYNRKVREIVEQSW 173


>05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960
          Length = 127

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +2

Query: 5   AAQLYKENRREYEKRVKACVEQSF 76
           AA+L+ EN+REY ++V+  VEQS+
Sbjct: 101 AARLFSENKREYNRKVREIVEQSW 124


>03_06_0260 -
           32717142-32717270,32717743-32717831,32717950-32718039,
           32721571-32721596,32721772-32721896
          Length = 152

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 13/24 (54%), Positives = 20/24 (83%)
 Frame = +2

Query: 5   AAQLYKENRREYEKRVKACVEQSF 76
           AA+L+ EN+REY ++V+  VEQS+
Sbjct: 126 AARLFSENKREYNRKVREIVEQSW 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,770,059
Number of Sequences: 37544
Number of extensions: 272380
Number of successful extensions: 387
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)