Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1308
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64435-1|AAA28309.1|  151|Drosophila melanogaster DHR6 protein.        58   2e-08
M63792-1|AAA28308.1|  151|Drosophila melanogaster DHR6 protein.        58   2e-08
BT003481-1|AAO39484.1|  151|Drosophila melanogaster RE56673p pro...    58   2e-08
AE014297-171|AAF52079.1|  151|Drosophila melanogaster CG2013-PA ...    58   2e-08
AY118666-1|AAM50035.1|  791|Drosophila melanogaster SD26855p pro...    29   5.2  
AE014296-3270|AAZ66056.1| 4705|Drosophila melanogaster CG7749-PB...    29   5.2  
AE014296-3269|AAF49078.2| 4705|Drosophila melanogaster CG7749-PA...    29   5.2  

>M64435-1|AAA28309.1|  151|Drosophila melanogaster DHR6 protein.
          Length = 151

 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +2

Query: 5   AAQLYKENRREYEKRVKACVEQSFID 82
           AAQLYKENRREYEKRVKACVEQSFID
Sbjct: 126 AAQLYKENRREYEKRVKACVEQSFID 151


>M63792-1|AAA28308.1|  151|Drosophila melanogaster DHR6 protein.
          Length = 151

 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +2

Query: 5   AAQLYKENRREYEKRVKACVEQSFID 82
           AAQLYKENRREYEKRVKACVEQSFID
Sbjct: 126 AAQLYKENRREYEKRVKACVEQSFID 151


>BT003481-1|AAO39484.1|  151|Drosophila melanogaster RE56673p
           protein.
          Length = 151

 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +2

Query: 5   AAQLYKENRREYEKRVKACVEQSFID 82
           AAQLYKENRREYEKRVKACVEQSFID
Sbjct: 126 AAQLYKENRREYEKRVKACVEQSFID 151


>AE014297-171|AAF52079.1|  151|Drosophila melanogaster CG2013-PA
           protein.
          Length = 151

 Score = 57.6 bits (133), Expect = 2e-08
 Identities = 26/26 (100%), Positives = 26/26 (100%)
 Frame = +2

Query: 5   AAQLYKENRREYEKRVKACVEQSFID 82
           AAQLYKENRREYEKRVKACVEQSFID
Sbjct: 126 AAQLYKENRREYEKRVKACVEQSFID 151


>AY118666-1|AAM50035.1|  791|Drosophila melanogaster SD26855p
           protein.
          Length = 791

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -2

Query: 238 LL*ILTENVQTSM-QVIKFTIYTLIPMNACIRR--FPRQHC 125
           +L IL  NV T+   VI F   + IP+N C+ R  F  +HC
Sbjct: 191 ILQILKNNVTTTFTDVISFAAPSYIPVNTCVCRPGFDGKHC 231


>AE014296-3270|AAZ66056.1| 4705|Drosophila melanogaster CG7749-PB,
            isoform B protein.
          Length = 4705

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -2

Query: 238  LL*ILTENVQTSM-QVIKFTIYTLIPMNACIRR--FPRQHC 125
            +L IL  NV T+   VI F   + IP+N C+ R  F  +HC
Sbjct: 3838 ILQILKNNVTTTFTDVISFAAPSYIPVNTCVCRPGFDGKHC 3878


>AE014296-3269|AAF49078.2| 4705|Drosophila melanogaster CG7749-PA,
            isoform A protein.
          Length = 4705

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = -2

Query: 238  LL*ILTENVQTSM-QVIKFTIYTLIPMNACIRR--FPRQHC 125
            +L IL  NV T+   VI F   + IP+N C+ R  F  +HC
Sbjct: 3838 ILQILKNNVTTTFTDVISFAAPSYIPVNTCVCRPGFDGKHC 3878


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,486,014
Number of Sequences: 53049
Number of extensions: 526485
Number of successful extensions: 659
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)