Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1307
(788 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 339 2e-95
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 339 2e-95
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 4.3
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 339 bits (833), Expect = 2e-95
Identities = 155/181 (85%), Positives = 170/181 (93%)
Frame = +2
Query: 2 ASGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 181
ASGGAAGATSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGF
Sbjct: 120 ASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGF 179
Query: 182 GVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRR 361
GVSVQGIIIYRA+YFGFYDTARGMLPDPK TP +ISW IAQ VTTVAGI+SYPFDTVRRR
Sbjct: 180 GVSVQGIIIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRR 239
Query: 362 MMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKV 541
MMMQSGRAKS+ILYK+T+HCWATI KTEG +AFFKGAFSN+LRGTGGA VLVLYDEIK +
Sbjct: 240 MMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVLVLYDEIKNL 299
Query: 542 L 544
L
Sbjct: 300 L 300
Score = 42.7 bits (96), Expect = 4e-06
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Frame = +2
Query: 5 SGGAAGATSLCFVYPLDFARTRLAAD-VGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRG 178
+GG A A S V P++ + L + K + + + G+ +C +I K G + +RG
Sbjct: 16 AGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75
Query: 179 FGVSVQGIIIYRASYFGFYDTARGMLPD--PKNTPIVISWAIAQTVTTVAGIIS----YP 340
+V +A F F D + + KNT + + AG S YP
Sbjct: 76 NLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYP 135
Query: 341 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 469
D R R+ G+A + + +C I K +G + ++G
Sbjct: 136 LDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178
Score = 31.9 bits (69), Expect = 0.007
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 293 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 466
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++++
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 467 GAFSNVLR 490
G +NV+R
Sbjct: 75 GNLANVIR 82
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 339 bits (833), Expect = 2e-95
Identities = 155/181 (85%), Positives = 170/181 (93%)
Frame = +2
Query: 2 ASGGAAGATSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRGF 181
ASGGAAGATSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+ GLYRGF
Sbjct: 120 ASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGF 179
Query: 182 GVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAGIISYPFDTVRRR 361
GVSVQGIIIYRA+YFGFYDTARGMLPDPK TP +ISW IAQ VTTVAGI+SYPFDTVRRR
Sbjct: 180 GVSVQGIIIYRAAYFGFYDTARGMLPDPKKTPFLISWGIAQVVTTVAGIVSYPFDTVRRR 239
Query: 362 MMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKV 541
MMMQSGRAKS+ILYK+T+HCWATI KTEG +AFFKGAFSN+LRGTGGA VLVLYDEIK +
Sbjct: 240 MMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILRGTGGALVLVLYDEIKNL 299
Query: 542 L 544
L
Sbjct: 300 L 300
Score = 42.7 bits (96), Expect = 4e-06
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 8/163 (4%)
Frame = +2
Query: 5 SGGAAGATSLCFVYPLDFARTRLAAD-VGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRG 178
+GG A A S V P++ + L + K + + + G+ +C +I K G + +RG
Sbjct: 16 AGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75
Query: 179 FGVSVQGIIIYRASYFGFYDTARGMLPD--PKNTPIVISWAIAQTVTTVAGIIS----YP 340
+V +A F F D + + KNT + + AG S YP
Sbjct: 76 NLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFLRYFVGNLASGGAAGATSLCFVYP 135
Query: 341 FDTVRRRMMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKG 469
D R R+ G+A + + +C I K +G + ++G
Sbjct: 136 LDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRG 178
Score = 31.9 bits (69), Expect = 0.007
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 293 AIAQTVTTVAGIISYPFDTVRRRMMMQ--SGRAKSDILYKNTIHCWATIAKTEGTSAFFK 466
A A + TTVA P + V+ + +Q S + + YK I C+ I K +G ++++
Sbjct: 20 AAAISKTTVA-----PIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWR 74
Query: 467 GAFSNVLR 490
G +NV+R
Sbjct: 75 GNLANVIR 82
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 22.6 bits (46), Expect = 4.3
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 534 LISSYKTSTKAPPVPLRTLEKAPL 463
L++++KT T+ P + LEK P+
Sbjct: 134 LVNAFKTLTQEPKNTNKFLEKGPV 157
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,862
Number of Sequences: 438
Number of extensions: 3816
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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