Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1306
         (796 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070709-1|AAL48180.1|  652|Drosophila melanogaster SD02261p pro...   217   1e-56
AE014296-3203|AAF49118.1|  652|Drosophila melanogaster CG8743-PA...   217   1e-56
AY119217-1|AAM51077.1|  197|Drosophila melanogaster SD16010p pro...    29   9.7  
AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p pro...    29   9.7  
AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA...    29   9.7  
AE013599-3246|AAF46746.1|  197|Drosophila melanogaster CG15678-P...    29   9.7  

>AY070709-1|AAL48180.1|  652|Drosophila melanogaster SD02261p
           protein.
          Length = 652

 Score =  217 bits (530), Expect = 1e-56
 Identities = 96/149 (64%), Positives = 115/149 (77%)
 Frame = +2

Query: 239 PNANNEQDFPHQSTSFSPPTQMEEKMRRKLQFFFMNPIEKWKAKRKFPYKFVVQVIKIVL 418
           P+ +  ++ P    S S  +  EE+MRRKLQFFFMNPIEKW+AKRKFPYKFVVQ++KI L
Sbjct: 71  PSVDGREEQPEFPGS-SAASYQEERMRRKLQFFFMNPIEKWQAKRKFPYKFVVQIVKIFL 129

Query: 419 VTFQLCLFAHNRYNHVNYTWDNRIAFSHLFLLGWDSTREINAYPPGAGPLALYKIDEFYN 598
           VT QLCLFAH+RYNH+NYT DNR AFSHLFL GWDS+RE+ +YPP  GP ALY   EF++
Sbjct: 130 VTMQLCLFAHSRYNHINYTGDNRFAFSHLFLRGWDSSREVESYPPAVGPFALYLKSEFFD 189

Query: 599 TLDYAVAGYTNLSNAIGPYSYNDENNFMP 685
           T+ YAV GY N+S +IGPY Y   NN MP
Sbjct: 190 TVQYAVNGYANVSRSIGPYDYPTPNNTMP 218



 Score = 36.3 bits (80), Expect = 0.048
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 708 NYKQGIIYGFNESYQFNSEVFETC 779
           NY++G I+GFNESY F+  + E C
Sbjct: 226 NYREGTIFGFNESYIFDPHIDEVC 249


>AE014296-3203|AAF49118.1|  652|Drosophila melanogaster CG8743-PA
           protein.
          Length = 652

 Score =  217 bits (530), Expect = 1e-56
 Identities = 96/149 (64%), Positives = 115/149 (77%)
 Frame = +2

Query: 239 PNANNEQDFPHQSTSFSPPTQMEEKMRRKLQFFFMNPIEKWKAKRKFPYKFVVQVIKIVL 418
           P+ +  ++ P    S S  +  EE+MRRKLQFFFMNPIEKW+AKRKFPYKFVVQ++KI L
Sbjct: 71  PSVDGREEQPEFPGS-SAASYQEERMRRKLQFFFMNPIEKWQAKRKFPYKFVVQIVKIFL 129

Query: 419 VTFQLCLFAHNRYNHVNYTWDNRIAFSHLFLLGWDSTREINAYPPGAGPLALYKIDEFYN 598
           VT QLCLFAH+RYNH+NYT DNR AFSHLFL GWDS+RE+ +YPP  GP ALY   EF++
Sbjct: 130 VTMQLCLFAHSRYNHINYTGDNRFAFSHLFLRGWDSSREVESYPPAVGPFALYLKSEFFD 189

Query: 599 TLDYAVAGYTNLSNAIGPYSYNDENNFMP 685
           T+ YAV GY N+S +IGPY Y   NN MP
Sbjct: 190 TVQYAVNGYANVSRSIGPYDYPTPNNTMP 218



 Score = 36.3 bits (80), Expect = 0.048
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +3

Query: 708 NYKQGIIYGFNESYQFNSEVFETC 779
           NY++G I+GFNESY F+  + E C
Sbjct: 226 NYREGTIFGFNESYIFDPHIDEVC 249


>AY119217-1|AAM51077.1|  197|Drosophila melanogaster SD16010p
           protein.
          Length = 197

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +2

Query: 149 LEVIPMDEIMHAPDDTTCSEGEDDHKKEIRPNANNEQDFPHQSTSFS 289
           + VI  D    + DD  CS  + +H++   PN + +   P ++T ++
Sbjct: 3   VRVIETDSASDSYDDDECSTCQKEHEQGKSPNKSKKSSTPPETTIYA 49


>AY052115-1|AAK93539.1| 1358|Drosophila melanogaster SD06557p
           protein.
          Length = 1358

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
 Frame = +2

Query: 209 GEDDHKKEIRPNANNEQDFPHQSTS-----FSPPTQMEE 310
           GE+   KE+  NA+ EQ+  H + +     F PP+++EE
Sbjct: 77  GEEPKDKEVVENASEEQEHDHAADTSSEYEFVPPSRLEE 115


>AE014296-2810|AAF49404.2| 1734|Drosophila melanogaster CG9715-PA
           protein.
          Length = 1734

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
 Frame = +2

Query: 209 GEDDHKKEIRPNANNEQDFPHQSTS-----FSPPTQMEE 310
           GE+   KE+  NA+ EQ+  H + +     F PP+++EE
Sbjct: 453 GEEPKDKEVVENASEEQEHDHAADTSSEYEFVPPSRLEE 491


>AE013599-3246|AAF46746.1|  197|Drosophila melanogaster CG15678-PA
           protein.
          Length = 197

 Score = 28.7 bits (61), Expect = 9.7
 Identities = 12/47 (25%), Positives = 24/47 (51%)
 Frame = +2

Query: 149 LEVIPMDEIMHAPDDTTCSEGEDDHKKEIRPNANNEQDFPHQSTSFS 289
           + VI  D    + DD  CS  + +H++   PN + +   P ++T ++
Sbjct: 3   VRVIETDSASDSYDDDECSTCQKEHEQGKSPNKSKKSSTPPETTIYA 49


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,574,441
Number of Sequences: 53049
Number of extensions: 695826
Number of successful extensions: 1703
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1700
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3695805360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)