Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1302
         (792 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113500-1|AAM29505.1|  441|Drosophila melanogaster RE56208p pro...    31   1.8  
AE014297-4477|AAS65229.1|  441|Drosophila melanogaster CG31038-P...    31   1.8  
BT003638-1|AAO39642.1|  511|Drosophila melanogaster AT17761p pro...    29   7.3  
AE014296-1814|AAN11912.1|  511|Drosophila melanogaster CG12362-P...    29   7.3  
AE014296-1813|AAF50159.1|  511|Drosophila melanogaster CG12362-P...    29   7.3  
AY119481-1|AAM50135.1| 1288|Drosophila melanogaster GH07148p pro...    29   9.6  
AE014298-1522|AAF47973.2| 1288|Drosophila melanogaster CG1582-PA...    29   9.6  

>AY113500-1|AAM29505.1|  441|Drosophila melanogaster RE56208p
           protein.
          Length = 441

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 700 IYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIYRWFAEFQRGRVKLSD 557
           I + FR  L   Q  +   +AFG   PS   + +W+  FQ G   L +
Sbjct: 54  ILFGFRRRLHPAQIFEECRNAFGPFCPSAQYVAKWYQRFQDGFFNLDE 101


>AE014297-4477|AAS65229.1|  441|Drosophila melanogaster CG31038-PC,
           isoform C protein.
          Length = 441

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -3

Query: 700 IYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIYRWFAEFQRGRVKLSD 557
           I + FR  L   Q  +   +AFG   PS   + +W+  FQ G   L +
Sbjct: 54  ILFGFRRRLHPAQIFEECRNAFGPFCPSAQYVAKWYQRFQDGFFNLDE 101


>BT003638-1|AAO39642.1|  511|Drosophila melanogaster AT17761p
           protein.
          Length = 511

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = +1

Query: 655 QHTVFVLNHFESHNKSSLLNFLESIP--FSQR---LNKFDKTS*LDRES 786
           Q T  +LNHF+   +S   N+ ES P  F QR   LN F+K   ++RES
Sbjct: 82  QVTRIILNHFKWDKESLFENYFESNPKDFFQRAHVLNPFEKK--IERES 128


>AE014296-1814|AAN11912.1|  511|Drosophila melanogaster CG12362-PB,
           isoform B protein.
          Length = 511

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = +1

Query: 655 QHTVFVLNHFESHNKSSLLNFLESIP--FSQR---LNKFDKTS*LDRES 786
           Q T  +LNHF+   +S   N+ ES P  F QR   LN F+K   ++RES
Sbjct: 82  QVTRIILNHFKWDKESLFENYFESNPKDFFQRAHVLNPFEKK--IERES 128


>AE014296-1813|AAF50159.1|  511|Drosophila melanogaster CG12362-PA,
           isoform A protein.
          Length = 511

 Score = 29.1 bits (62), Expect = 7.3
 Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
 Frame = +1

Query: 655 QHTVFVLNHFESHNKSSLLNFLESIP--FSQR---LNKFDKTS*LDRES 786
           Q T  +LNHF+   +S   N+ ES P  F QR   LN F+K   ++RES
Sbjct: 82  QVTRIILNHFKWDKESLFENYFESNPKDFFQRAHVLNPFEKK--IERES 128


>AY119481-1|AAM50135.1| 1288|Drosophila melanogaster GH07148p
           protein.
          Length = 1288

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 293 CVESFESSDAPSNASRLLLFTERMRYPSGKQL 388
           C+E++E     + A+ LLL+   MR P  +QL
Sbjct: 136 CLEAYEHCSGDTEAALLLLYRRYMRIPDEEQL 167


>AE014298-1522|AAF47973.2| 1288|Drosophila melanogaster CG1582-PA
           protein.
          Length = 1288

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 293 CVESFESSDAPSNASRLLLFTERMRYPSGKQL 388
           C+E++E     + A+ LLL+   MR P  +QL
Sbjct: 136 CLEAYEHCSGDTEAALLLLYRRYMRIPDEEQL 167


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,029,032
Number of Sequences: 53049
Number of extensions: 825846
Number of successful extensions: 2108
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2108
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)