Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1302
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 76 3e-14
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical ... 64 1e-10
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 63 3e-10
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z83219-6|CAB05696.5| 351|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z83219-2|CAB05695.1| 377|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z99273-3|CAB16478.1| 392|Caenorhabditis elegans Hypothetical pr... 31 0.94
AL033510-2|CAA22065.1| 281|Caenorhabditis elegans Hypothetical ... 30 1.7
AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical ... 29 2.9
U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.8
U41540-10|AAK39228.1| 372|Caenorhabditis elegans Hypothetical p... 28 6.7
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 75.8 bits (178), Expect = 3e-14
Identities = 51/161 (31%), Positives = 78/161 (48%)
Frame = -3
Query: 733 MELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIYRWFAEFQRGRVKLSDD 554
++L R + R ++ Y+FR G + + + A G+ A S T WF +F+ G L +
Sbjct: 4 IKLERRDVRLLLLYEFRLGHSAMEAERNICGAMGEGALSYNTAKSWFQKFKNGDFSLEEI 63
Query: 553 PRQGRPKTAVSQENVDAVRKLIEEDRHVAYREIQATLDIGMSQIQIILHEQLGVKKLFSR 374
R GRP V D V KL+EE+ ++ RE++ L+ S I L +LG
Sbjct: 64 ERSGRP---VELNEEDLV-KLVEEEPRLSLREMEEKLECCHSTIARHL-GRLGFTSKLGI 118
Query: 373 WIPHSLCEEQKAARVTWCVRTLERFHAGSSNAVYNIVSGDE 251
W+PH L QK RV C + L + + N+V+GDE
Sbjct: 119 WVPHELSASQKLTRVNVCTQLLT--FRRKFDWLNNLVTGDE 157
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 74.1 bits (174), Expect = 1e-13
Identities = 50/161 (31%), Positives = 77/161 (47%)
Frame = -3
Query: 733 MELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIYRWFAEFQRGRVKLSDD 554
++L R + R ++ Y+FR G + + + A G+ A S T WF + + G L +
Sbjct: 4 IKLERRDVRLLLLYEFRLGHSAMEAERNICGAMGEGALSYNTAKSWFQKLKNGDFSLEEI 63
Query: 553 PRQGRPKTAVSQENVDAVRKLIEEDRHVAYREIQATLDIGMSQIQIILHEQLGVKKLFSR 374
R GRP V D V KL+EE+ ++ RE++ L+ S I L +LG
Sbjct: 64 ERSGRP---VELNEEDLV-KLVEEEPRLSLREMEEKLECCHSTIARHL-GRLGFTSKLGT 118
Query: 373 WIPHSLCEEQKAARVTWCVRTLERFHAGSSNAVYNIVSGDE 251
W+PH L QK RV C + L + + N+V+GDE
Sbjct: 119 WVPHELSASQKLTRVNVCTQLLT--FRRKFDWLNNLVTGDE 157
>AC006747-1|AAF60509.1| 311|Caenorhabditis elegans Hypothetical
protein Y39A3A.1 protein.
Length = 311
Score = 63.7 bits (148), Expect = 1e-10
Identities = 42/133 (31%), Positives = 67/133 (50%)
Frame = -3
Query: 649 MISAFGDEAPSKTTIYRWFAEFQRGRVKLSDDPRQGRPKTAVSQENVDAVRKLIEEDRHV 470
M + GD + S T+ WF + ++ L D PR GRP+ + ++ + + +E+D
Sbjct: 1 MCAVLGDNSVSYNTMKFWFEKIKKKNYDLDDKPRSGRPRLDIDED----ISRALEDDPRS 56
Query: 469 AYREIQATLDIGMSQIQIILHEQLGVKKLFSRWIPHSLCEEQKAARVTWCVRTLERFHAG 290
REI ATL + I LHE V K F + +PH+L + QK R + L R
Sbjct: 57 MSREISATLKRPHTTIINHLHESGRVPK-FGQLVPHNLSDSQKNLRCDLSLSLLTR--KR 113
Query: 289 SSNAVYNIVSGDE 251
+++ V +I +GDE
Sbjct: 114 TTDWVKDITTGDE 126
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 62.9 bits (146), Expect = 3e-10
Identities = 44/130 (33%), Positives = 62/130 (47%)
Frame = -3
Query: 640 AFGDEAPSKTTIYRWFAEFQRGRVKLSDDPRQGRPKTAVSQENVDAVRKLIEEDRHVAYR 461
A G+ A S T WF +F+ G L + R GRP V D V KL+EE+ ++ R
Sbjct: 10 AMGEGALSYNTAKSWFQKFKNGDFSLEEIERSGRP---VELNEEDLV-KLVEEEPRLSLR 65
Query: 460 EIQATLDIGMSQIQIILHEQLGVKKLFSRWIPHSLCEEQKAARVTWCVRTLERFHAGSSN 281
E++ L+ S I L +LG W+PH L QK RV C + L +
Sbjct: 66 EMEEKLECCHSTIARHL-GRLGFTSKLGTWVPHELSASQKLTRVNVCTQLLT--FRRKFD 122
Query: 280 AVYNIVSGDE 251
+ N+V+GDE
Sbjct: 123 WLNNLVTGDE 132
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/95 (25%), Positives = 43/95 (45%)
Frame = -3
Query: 568 KLSDDPRQGRPKTAVSQENVDAVRKLIEEDRHVAYREIQATLDIGMSQIQIILHEQLGVK 389
K ++D + R + A EN K++EE++H + Q LD +++ +L EQL +
Sbjct: 349 KSTEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVK-VLKEQL-ER 406
Query: 388 KLFSRWIPHSLCEEQKAARVTWCVRTLERFHAGSS 284
+ L QKA ++ + L+ SS
Sbjct: 407 AQSALESSQELASSQKADKIQELEKELQNAQKRSS 441
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/95 (25%), Positives = 43/95 (45%)
Frame = -3
Query: 568 KLSDDPRQGRPKTAVSQENVDAVRKLIEEDRHVAYREIQATLDIGMSQIQIILHEQLGVK 389
K ++D + R + A EN K++EE++H + Q LD +++ +L EQL +
Sbjct: 349 KSTEDEKLAREQLAGELENAKEDLKVVEEEKHTGIQRAQGALDDAEKEVK-VLKEQL-ER 406
Query: 388 KLFSRWIPHSLCEEQKAARVTWCVRTLERFHAGSS 284
+ L QKA ++ + L+ SS
Sbjct: 407 AQSALESSQELASSQKADKIQELEKELQNAQKRSS 441
>Z83219-6|CAB05696.5| 351|Caenorhabditis elegans Hypothetical
protein C31C9.4 protein.
Length = 351
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = -3
Query: 739 EKMELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIYRWFAEFQRGRVKLS 560
E +E + R I D L ++ + AFGDE WF F G + L+
Sbjct: 3 ESIETSPIAHRTFILNDALLKLPIEESFKKFCDAFGDELMEYREFELWFYRFYNGNLDLN 62
Query: 559 DDPRQGRPKTAVSQE-NVDAVRKLIE 485
D Q PKT + Q+ ++ + +++E
Sbjct: 63 YDMSQ-EPKTPLLQDMPLEMIEEIME 87
>Z83219-2|CAB05695.1| 377|Caenorhabditis elegans Hypothetical
protein C31C9.3 protein.
Length = 377
Score = 33.1 bits (72), Expect = 0.23
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -3
Query: 709 RAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIYRWFAEFQRGRVKLSDDPRQGRPKT 530
RA I Y+ R + +AFG++ RWF F G L D + PKT
Sbjct: 13 RACILYEVRQKRPIFESFKNFCNAFGNDFMEYREFERWFYRFYHGNEDLDYDMSR-EPKT 71
Query: 529 A-VSQENVDAVRKLIE 485
A +S+ ++ + K++E
Sbjct: 72 ASLSELPIEILFKIVE 87
>Z99273-3|CAB16478.1| 392|Caenorhabditis elegans Hypothetical
protein Y45F10C.3 protein.
Length = 392
Score = 31.1 bits (67), Expect = 0.94
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -3
Query: 745 VVEKMELTRENS---RAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIYRWFAEFQRG 575
++EK +L R N RA I ++ G + + ++ A G + WF +F+RG
Sbjct: 18 MIEKKDLMRNNRTALRACILFNCLLGTSIRDAYNQFCRAVGSDVMEYREYEFWFYQFKRG 77
Query: 574 RVKLSD 557
SD
Sbjct: 78 DADFSD 83
>AL033510-2|CAA22065.1| 281|Caenorhabditis elegans Hypothetical
protein Y40H7A.2 protein.
Length = 281
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 733 MELTRENSRAMIYYDFRSGLTQKQCVDRMISAFGDEAPSKTTIYRWF 593
++L R + R ++ Y+FR G + + + A G+ A S T WF
Sbjct: 4 IKLERRDVRLLLLYEFRLGHSAMEAERNICGAMGEGALSYNTAKSWF 50
>AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical
protein F56C3.2 protein.
Length = 457
Score = 29.5 bits (63), Expect = 2.9
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = -3
Query: 751 CLVVEKMELTRENSRAMIYYDFRSGLTQKQCV-DRMISAFGDEAPSKTTIYRWFAEFQRG 575
CL +K+ + RA I Y+ L ++ V + FG + W++ FQ G
Sbjct: 3 CLPTDKLSI-----RACILYEALEHLNDEKYVYSNICRTFGYHLINFQEFNHWYSRFQNG 57
Query: 574 RVKLSDDPRQ--GRPK 533
++L D+ + G PK
Sbjct: 58 NLELCDESKDVGGHPK 73
>U21310-1|AAA62519.1| 997|Caenorhabditis elegans Hypothetical
protein F40H6.2 protein.
Length = 997
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 261 DTMLYTAFEDPAWNLSRVLTHQVTRAAFCSSQSECGIHRE 380
DT +Y F+D + S + AF SS++ CGI E
Sbjct: 211 DTHVYIGFKDSIQDASNTYIYSYIGYAFTSSENTCGIPLE 250
>U41540-10|AAK39228.1| 372|Caenorhabditis elegans Hypothetical
protein F35H12.1 protein.
Length = 372
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -3
Query: 592 AEFQRGRVKLSDDPRQGRPKTAVSQ-ENVDAVRKLIEE 482
AE++RGR K S+ PRQ R + ++ ++ + + IEE
Sbjct: 254 AEYRRGRSKASEVPRQARQYLSKTKLPDIQIIHQQIEE 291
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,369,229
Number of Sequences: 27780
Number of extensions: 440612
Number of successful extensions: 1346
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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