Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1300
(818 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0258 - 11153709-11156090 32 0.48
06_03_1368 - 29612463-29612638,29613135-29613222,29613334-296134... 31 0.83
01_06_1437 - 37358912-37359226 31 1.1
07_03_1512 + 27288779-27289222,27298101-27298399,27298499-272985... 31 1.5
06_01_0881 + 6754600-6754681,6754742-6755284,6755461-6755523,675... 30 1.9
07_03_1382 - 26170563-26170631,26171151-26171843 30 2.5
02_02_0414 + 9972157-9972257,9972925-9973003,9973657-9973755,997... 30 2.5
09_03_0145 - 12749288-12751510 29 3.4
07_03_0323 - 16773826-16774569,16774976-16775211,16775337-16775646 29 3.4
06_01_0525 - 3800578-3801018,3801395-3801504,3801608-3801683,380... 29 3.4
04_03_0786 - 19621674-19621960,19623152-19623193,19623679-19624339 29 3.4
10_05_0026 + 8262237-8262899,8263300-8263509,8263599-8265480,826... 29 4.4
04_01_0515 + 6740112-6740757,6755297-6755570,6755595-6755871 29 4.4
02_05_0496 - 29499959-29500653,29501039-29501093 29 4.4
08_01_0059 - 394001-394708 29 5.9
07_03_1160 - 24430240-24431268 29 5.9
04_01_0293 + 3881375-3883698,3906619-3907636,3907820-3908309,391... 29 5.9
03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621 29 5.9
01_05_0293 - 20532559-20532572,20532573-20532798,20532926-205339... 29 5.9
12_01_0954 - 9496370-9496643,9497181-9497239,9497574-9498179 28 7.8
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 28 7.8
10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869 28 7.8
10_06_0119 - 10956190-10956754,10956984-10957139,10958402-10958622 28 7.8
09_04_0192 + 15478270-15480257,15480358-15480640,15480727-15481116 28 7.8
08_02_1049 + 23944526-23945473 28 7.8
02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,162... 28 7.8
01_06_0373 - 28841462-28842850 28 7.8
>05_03_0258 - 11153709-11156090
Length = 793
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +2
Query: 260 PPPVEEPGQAMDKP-PEPKPNLIDKLVIIFAETKTHSPRFTLPAFMKAPPNELYRRLLPA 436
PPP + P P P P + + + P +LPAF+ + +EL R LP+
Sbjct: 56 PPPPQPPATRRPHPTPTPPHSFLSPAAQSLVAAISSQPLPSLPAFLSSRRDELLRSDLPS 115
Query: 437 MLFVL 451
+L L
Sbjct: 116 LLKAL 120
>06_03_1368 -
29612463-29612638,29613135-29613222,29613334-29613474,
29613561-29613595,29613990-29614054,29614286-29614335,
29614417-29614521,29614608-29614688,29614771-29614852,
29614941-29614995,29615111-29616164,29617202-29617289,
29617379-29617485,29617568-29617686,29617784-29617994
Length = 818
Score = 31.5 bits (68), Expect = 0.83
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2
Query: 242 TDQDNPPPPVEEPGQAMDKPPEPKP 316
TDQ + PPP PG A PPE P
Sbjct: 3 TDQPHLPPPAPPPGAAAADPPESTP 27
>01_06_1437 - 37358912-37359226
Length = 104
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 263 PPVEEPGQAM-DKPPEPKPNLIDKLVIIFAETKTHSPRFTLPAFM 394
PP+ PG+ + D PP P P +D+L+ + HS LP F+
Sbjct: 44 PPLSPPGRTVADGPPPPPPRALDRLISL-----RHSSLELLPLFL 83
>07_03_1512 +
27288779-27289222,27298101-27298399,27298499-27298589,
27298701-27298766,27299151-27302660,27311604-27312224
Length = 1676
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 545 ELARIGQGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELY 694
E + QGS ++ Y+ + AR P+D+ T Q K L+ + E Y
Sbjct: 454 EFRALNQGSRSVTEYLHDFNRLARYAPEDIRTDEERQEKFLEGLNDELSY 503
>06_01_0881 +
6754600-6754681,6754742-6755284,6755461-6755523,
6755653-6755666
Length = 233
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
Frame = -1
Query: 803 PEVPPWPPVLTS----------PVLIPDSWCFAIVHQKPSTPQMCHCTIPLQKWNP 666
PE+PP PP+L S PV +P+S A+ P TPQ C L P
Sbjct: 80 PELPPLPPLLPSVSITPGSSGAPVQVPNSSQSALAVAAPITPQPTECLSSLMALMP 135
>07_03_1382 - 26170563-26170631,26171151-26171843
Length = 253
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 257 PPPPVEEPGQAMDKPPEPKPNL 322
PPPP + G A + PP P P L
Sbjct: 186 PPPPPQPSGDANENPPPPPPPL 207
>02_02_0414 +
9972157-9972257,9972925-9973003,9973657-9973755,
9973848-9973913,9974225-9974376,9974503-9974584,
9974696-9974781,9974919-9975098,9975320-9975717,
9976192-9976790,9977141-9977239
Length = 646
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 209 GIENKVIMAEKTDQDNP-PPPVEEPGQAMDKPPEP 310
G+ + I+ DQ+ PPP E Q+MD PP+P
Sbjct: 404 GVSSNAIVPYYDDQNGGLPPPPWEIQQSMDNPPQP 438
>09_03_0145 - 12749288-12751510
Length = 740
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +2
Query: 260 PPPVEEPGQAMDKPPEPKPNLIDKLVIIFAETKTHSPRFTLPAFMKAP 403
PPP PG +PP P P D + RF PA + +P
Sbjct: 41 PPPPALPGMPHGRPPPPFPGGRDAFPQAASTVVPDPARFFAPALLSSP 88
>07_03_0323 - 16773826-16774569,16774976-16775211,16775337-16775646
Length = 429
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 563 QGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELY 694
QGS + Y+ + + AR P+DV T Q K L+ + E Y
Sbjct: 342 QGSRTVTEYLHEFNRLARYAPEDVRTDEERQEKFLEGLNDELSY 385
>06_01_0525 -
3800578-3801018,3801395-3801504,3801608-3801683,
3801757-3801909,3802088-3802159,3802242-3802322,
3802936-3803001,3803117-3803182,3803277-3803327,
3803429-3803512,3803988-3804088,3804188-3804329,
3804820-3804917,3805194-3805263,3805409-3805477
Length = 559
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 233 AEKTDQDNPPPPVEEPGQAMDKPPEPKP 316
AE+ ++ PPP EP + PEP+P
Sbjct: 310 AEEEEKPASPPPAPEPEPEQEPEPEPEP 337
>04_03_0786 - 19621674-19621960,19623152-19623193,19623679-19624339
Length = 329
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 236 EKTDQDNPPPPVEEPGQAMDKPPEPKPNLIDKLVIIFAETKTHSPR 373
E+ D D PP P A PP P P + ++ +E K+ PR
Sbjct: 187 EEEDDDEATPPATTPAAAPAPPPAPAP----AVPVLTSEKKSDPPR 228
>10_05_0026 +
8262237-8262899,8263300-8263509,8263599-8265480,
8265508-8265704,8275672-8275824
Length = 1034
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 545 ELARIGQGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELY 694
E + QGS ++ Y+ + + AR P+DV Q K L+ + E Y
Sbjct: 351 EFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEERQEKFLEGLNDELSY 400
>04_01_0515 + 6740112-6740757,6755297-6755570,6755595-6755871
Length = 398
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 545 ELARIGQGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELYN 697
E + QG+ + Y+ + + AR +P+DV T +Q K L + +EL N
Sbjct: 113 EFRALHQGNRTVTEYLHEFNRLARYEPEDVRTDAEKQEKFLAGL-DDELTN 162
>02_05_0496 - 29499959-29500653,29501039-29501093
Length = 249
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 209 GIENKVIMAEKTDQDNPPPPVEEPGQAMDKPPEPKPN 319
G E++ A+ Q PPPP ++ A KPP+ N
Sbjct: 92 GPEHEHHQAQPQPQQEPPPPAQDAPPAEPKPPKRGKN 128
>08_01_0059 - 394001-394708
Length = 235
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 257 PPPPVEEPGQAMDKPPEPKPNLIDKLVIIF 346
PPPP P + PP P P+++ ++++F
Sbjct: 54 PPPPHISPPAPVPPPPSPPPHIV--IIVVF 81
>07_03_1160 - 24430240-24431268
Length = 342
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 251 DNPPPPVEEPGQAMDKPPEPKPN 319
D PP P + D+PP+P PN
Sbjct: 255 DQPPQPCPDGPPKPDQPPQPNPN 277
>04_01_0293 +
3881375-3883698,3906619-3907636,3907820-3908309,
3914729-3914823,3914854-3915213
Length = 1428
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 545 ELARIGQGSAALIAYVRQLHLTARSKPQDVVTTPTEQVKVLDSIFGEELY 694
E + QGS ++ Y+ + + AR P+DV Q K L+ + E Y
Sbjct: 152 EFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNGEERQEKFLEGLNDELSY 201
>03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621
Length = 388
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 239 KTDQDNPPPPVEEPGQAMDKPPEPKPNLID 328
K+ NPP P+E+ PP+P P+ ++
Sbjct: 221 KSYTGNPPQPLEKDASPQPPPPKPAPSRLE 250
>01_05_0293 -
20532559-20532572,20532573-20532798,20532926-20533960,
20534670-20534996
Length = 533
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +2
Query: 254 NPPPPVEEPGQAMDKPPEPKPNLIDKL 334
+PP P + +PPEP P +D L
Sbjct: 87 DPPAPAAAGDAVLPRPPEPDPTQVDNL 113
>12_01_0954 - 9496370-9496643,9497181-9497239,9497574-9498179
Length = 312
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 586 LCQTTTFDCSFQTSRCCYHTYRAGEGF 666
L Q T C C+H+Y AGEG+
Sbjct: 28 LHQAPTSPCQAPRPTSCFHSYAAGEGY 54
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 203 MQGIENKVIMAEKTDQDNPPPPVEEPGQAMDKPPEPKPN 319
MQG+ N++ + + +N PP+++P + + P P N
Sbjct: 773 MQGLPNQMRPPKHSFPENSRPPMQQPFEMAPRVPGPNQN 811
>10_08_0146 - 15184123-15184968,15185049-15185519,15185606-15185869
Length = 526
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 257 PPPPVEEPGQAMDKPPEPKPNLI 325
PPPP +EP PP P P I
Sbjct: 14 PPPPPQEPAPLSPPPPLPTPKPI 36
>10_06_0119 - 10956190-10956754,10956984-10957139,10958402-10958622
Length = 313
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 715 DGFWWTMAKHQLSGISTGLVRTGGQGGTSG 804
DG++W + H G+ T L + G G+ G
Sbjct: 185 DGYFWLVRHHLDEGLETSLAQRGAADGSRG 214
>09_04_0192 + 15478270-15480257,15480358-15480640,15480727-15481116
Length = 886
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 236 EKTDQDNP---PPPVEEPGQAMDKPPEPKPNLIDKLVII 343
E+ + NP PPP++ A D+PP P P + +++
Sbjct: 14 EEHETPNPSLTPPPMQLAALASDEPPPPPPEQSPRRIVV 52
>08_02_1049 + 23944526-23945473
Length = 315
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 206 QGIENKVIMAEKTDQDNPPPPVEEPG 283
+ + KV MA+K ++ PPP PG
Sbjct: 213 EAFQAKVAMADKVKEEEPPPVATRPG 238
>02_01_0246 + 1617326-1617367,1618903-1624419,1625040-1625498,
1625603-1625887,1626016-1626030,1626339-1626419,
1626909-1627322,1627423-1627719,1627801-1629864
Length = 3057
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +2
Query: 218 NKVIMAEKTDQ-DNPPPPVEEPGQAMDK----PPEPKPNLIDKLVIIFAETKTHS 367
++V M E ++Q + PPV EP + + P P+P L D V E +TH+
Sbjct: 1187 HEVEMTESSEQMKDTEPPVPEPESSEEMRDTAPTVPEPTLQDSRVASVEEIETHN 1241
>01_06_0373 - 28841462-28842850
Length = 462
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 263 PPVEEPGQAMDKPPEP 310
PP ++P + DKPPEP
Sbjct: 292 PPSDDPAKKFDKPPEP 307
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,867,426
Number of Sequences: 37544
Number of extensions: 545695
Number of successful extensions: 2877
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2779
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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