Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1298
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.        25   2.2  
AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450 pr...    24   5.1  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   6.7  
AY745223-1|AAU93490.1|   83|Anopheles gambiae cytochrome P450 pr...    23   8.9  

>AM182454-1|CAJ65692.1|  182|Anopheles gambiae globin 2 protein.
          Length = 182

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -3

Query: 443 HKHPVYVCPWQLSPDPGSLHVLPSHSVH 360
           HKHP Y+  +  + DP +  ++ + S++
Sbjct: 38  HKHPRYIAYFDFTDDPNAQSLVDNKSLY 65


>AY745222-1|AAU93489.1|  276|Anopheles gambiae cytochrome P450
          protein.
          Length = 276

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -1

Query: 82 RIGYYCRRVAD 50
          R GY CRRVAD
Sbjct: 15 RFGYACRRVAD 25


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 552 SSMAAACLEPSMTIPIAIPAASP 484
           S++AAA    S + P  IP+ASP
Sbjct: 154 SNVAAAAAGASASTPPTIPSASP 176


>AY745223-1|AAU93490.1|   83|Anopheles gambiae cytochrome P450
          protein.
          Length = 83

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 40 KGIYLPHGDSNSQCV 84
          KG +LP GD   QC+
Sbjct: 25 KGCFLPFGDGPRQCL 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,931
Number of Sequences: 2352
Number of extensions: 13649
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)