Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1297
         (599 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    27   0.61 
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.9  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   1.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   4.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.5  

>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 26.6 bits (56), Expect = 0.61
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = -1

Query: 194 NTMAIHYKCKNIKNNLHALMIK 129
           N MA+ +  +N++N  HALM+K
Sbjct: 76  NLMALIHLWRNVRNTKHALMLK 97


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 367  NRIGIPLGNLEITYSYIVWNK 305
            N+ G+  GN +ITY    WNK
Sbjct: 1064 NQEGVLTGNHQITYDGFHWNK 1084


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +3

Query: 231 HKSKFPNRVQATRTFYNKTYIRFLGLFQTIYEYVISKFPSGIPI 362
           H  +F NR Q  R FY     R +  F+T     +      IP+
Sbjct: 775 HTLRFANRRQWLRRFYRPVVQRVISSFRTTSHDAVCVLAGMIPL 818


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 450  ITNERTKTSGRTRERESVRERCFSF 376
            I N+  KTSG T++++ +  + F F
Sbjct: 1273 IKNDPMKTSGSTQQQQQMERQQFGF 1297


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 441 ERTKTSGRTRERESVRER 388
           ER + + R RERE  RER
Sbjct: 516 EREREAARERERERERER 533


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,538
Number of Sequences: 2352
Number of extensions: 10366
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)