Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1281
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical pr... 271 4e-73
Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical pr... 265 3e-71
S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA s... 220 1e-57
L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA s... 220 1e-57
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 39 0.005
Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical pr... 36 0.043
U00037-4|AAU20840.1| 454|Caenorhabditis elegans Prolyl trna syn... 35 0.075
U00037-3|AAA50660.1| 581|Caenorhabditis elegans Prolyl trna syn... 35 0.075
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical... 32 0.40
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 31 0.92
Z81015-6|CAE17725.1| 209|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical pr... 30 1.6
U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin pro... 30 1.6
AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical ... 30 1.6
Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical pr... 30 2.1
>Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical
protein T11G6.1a protein.
Length = 520
Score = 271 bits (664), Expect = 4e-73
Identities = 131/224 (58%), Positives = 165/224 (73%), Gaps = 4/224 (1%)
Frame = +3
Query: 117 ADPQGHLLLKIQEQGDLVRKLKAAKESNERVKEEVSKLLALKAQLVTEDAGPQK---FTL 287
A+ + L+ + Q GD +R+LK K +KE+V+ L+ K + E P+K F L
Sbjct: 3 AERKAILMQEAQALGDEIRQLKLDKADQAIIKEKVA-LMQAKRKEAGETGAPEKPGKFVL 61
Query: 288 KTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDS-KLIY 464
KT KGTRDY P Q +RN+VL + F R+GAE IDTPVFEL+DVL GKYGE+ KL+Y
Sbjct: 62 KTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEEGGKLVY 121
Query: 465 DLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRYHIAKVYRRDNPAMTRGRYREFYQCD 644
DL+DQGGE+LSLRYDLTVP ARYLAMNKIT + RY IAKVYRRD P M+RGRYREFYQCD
Sbjct: 122 DLQDQGGELLSLRYDLTVPFARYLAMNKITNITRYQIAKVYRRDQPVMSRGRYREFYQCD 181
Query: 645 FDIAGVYDPMVPDAECLKVVTEILEALDIGQYILKVNHRRLLDG 776
FDIAG YD M+P+AECL +V E+L L+IG++ + +NHR +L+G
Sbjct: 182 FDIAGQYDLMLPEAECLGIVDELLTKLEIGEFFINLNHRLILEG 225
>Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical
protein T11G6.1b protein.
Length = 521
Score = 265 bits (649), Expect = 3e-71
Identities = 127/219 (57%), Positives = 163/219 (74%), Gaps = 5/219 (2%)
Frame = +3
Query: 135 LLLKIQEQGDLVR-KLKAAKESNERVKEEVSKLLALKAQLVTEDAGPQK---FTLKTPKG 302
L +++ + V+ ++ A+ S R+KE+V+ L+ K + E P+K F LKT KG
Sbjct: 9 LAFSVRQAEETVKPRIAYAQRSGRRIKEKVA-LMQAKRKEAGETGAPEKPGKFVLKTGKG 67
Query: 303 TRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDS-KLIYDLKDQ 479
TRDY P Q +RN+VL + F R+GAE IDTPVFEL+DVL GKYGE+ KL+YDL+DQ
Sbjct: 68 TRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEEGGKLVYDLQDQ 127
Query: 480 GGEILSLRYDLTVPLARYLAMNKITTLKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAG 659
GGE+LSLRYDLTVP ARYLAMNKIT + RY IAKVYRRD P M+RGRYREFYQCDFDIAG
Sbjct: 128 GGELLSLRYDLTVPFARYLAMNKITNITRYQIAKVYRRDQPVMSRGRYREFYQCDFDIAG 187
Query: 660 VYDPMVPDAECLKVVTEILEALDIGQYILKVNHRRLLDG 776
YD M+P+AECL +V E+L L+IG++ + +NHR +L+G
Sbjct: 188 QYDLMLPEAECLGIVDELLTKLEIGEFFINLNHRLILEG 226
>S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 514
Score = 220 bits (537), Expect = 1e-57
Identities = 101/139 (72%), Positives = 114/139 (82%), Gaps = 1/139 (0%)
Frame = +3
Query: 270 PQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGED 449
P KF LKT KGTRDY P Q +RN+VL + F R+GAE IDTPVFEL+DVL GKYGE+
Sbjct: 6 PGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEE 65
Query: 450 S-KLIYDLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRYHIAKVYRRDNPAMTRGRYR 626
KL+YDL+DQGGE+LSLRYDLTVP ARYLAMNKIT + RY IAKVYRRD P M+RGRYR
Sbjct: 66 GGKLVYDLQDQGGELLSLRYDLTVPFARYLAMNKITNITRYQIAKVYRRDQPVMSRGRYR 125
Query: 627 EFYQCDFDIAGVYDPMVPD 683
EFYQCDFDIAG YD M+P+
Sbjct: 126 EFYQCDFDIAGQYDLMLPE 144
>L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 525
Score = 220 bits (537), Expect = 1e-57
Identities = 101/139 (72%), Positives = 114/139 (82%), Gaps = 1/139 (0%)
Frame = +3
Query: 270 PQKFTLKTPKGTRDYNPQQMTIRNNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGED 449
P KF LKT KGTRDY P Q +RN+VL + F R+GAE IDTPVFEL+DVL GKYGE+
Sbjct: 17 PGKFVLKTGKGTRDYGPAQSALRNSVLQTVTETFNRYGAETIDTPVFELRDVLMGKYGEE 76
Query: 450 S-KLIYDLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRYHIAKVYRRDNPAMTRGRYR 626
KL+YDL+DQGGE+LSLRYDLTVP ARYLAMNKIT + RY IAKVYRRD P M+RGRYR
Sbjct: 77 GGKLVYDLQDQGGELLSLRYDLTVPFARYLAMNKITNITRYQIAKVYRRDQPVMSRGRYR 136
Query: 627 EFYQCDFDIAGVYDPMVPD 683
EFYQCDFDIAG YD M+P+
Sbjct: 137 EFYQCDFDIAGQYDLMLPE 155
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 38.7 bits (86), Expect = 0.005
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Frame = +3
Query: 465 DLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRYHIAKVYRRDNPAMTRGRYREFYQCD 644
++ D+ G ++L DL R+ N + +KR++ +VY + + G E ++C
Sbjct: 1105 EVLDRSGVPVALPMDLRQNFVRFCVRNSVQRMKRFNFGRVYSQTS---ANGHPHERWECC 1161
Query: 645 FDIAG--VYDPMVPDAECLKVVTE-ILEALDIGQYILKVNHRRLLD 773
D G P + +AE L V E ++ +L ++ LK+ H +L++
Sbjct: 1162 VDCIGPQCSSPSL-EAELLLVACEMMIGSLPGMKFTLKIGHAQLIE 1206
>Z75714-3|CAB00060.1| 1149|Caenorhabditis elegans Hypothetical
protein ZC434.5 protein.
Length = 1149
Score = 35.5 bits (78), Expect = 0.043
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +3
Query: 144 KIQEQGDLVRKLKAAKESNERVKEEVSKLLALKAQ 248
+I+ QG LVR+LK ++ K+ ++KLLALK Q
Sbjct: 881 QIESQGALVRELKGKDAKSQATKDAIAKLLALKKQ 915
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 135 LLLKIQEQGDLVRKLKAAKESNERVKEEVSKLLALKA 245
LL +I+EQG +VR K+ ++ + ++KLLALKA
Sbjct: 1089 LLKEIEEQGAVVRDAKSKDPKSQDSADAINKLLALKA 1125
Score = 31.9 bits (69), Expect = 0.53
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 147 IQEQGDLVRKLKAAKESNERVKEEVSKLLALKAQ 248
I+ QG LVR+LK ++ K+ ++KLL LK Q
Sbjct: 808 IEAQGLLVRELKGKDAKSQATKDAIAKLLELKKQ 841
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 147 IQEQGDLVRKLKAAKESNERVKEEVSKLLALK 242
I++QG +VR LK ++ K+ ++KLL LK
Sbjct: 737 IEQQGGIVRDLKTKDAKSQATKDAIAKLLDLK 768
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 144 KIQEQGDLVRKLKAAKESNERVKEEVSKLLALK 242
+I+ QG LVR LK ++ K+ ++KLL LK
Sbjct: 948 QIEAQGVLVRDLKNKDSKSQETKDAIAKLLELK 980
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 144 KIQEQGDLVRKLKAAKESNERVKEEVSKLLALKAQ 248
+I +Q LVR+LK ++ K+ ++KLL LK Q
Sbjct: 1020 QIDDQALLVRELKMKDAKSQETKDAIAKLLQLKKQ 1054
>U00037-4|AAU20840.1| 454|Caenorhabditis elegans Prolyl trna
synthetase protein1, isoform b protein.
Length = 454
Score = 34.7 bits (76), Expect = 0.075
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 144 KIQEQGDLVRKLKAAKESNERVKEE-VSKLLALK 242
+I+EQG VR++K K S E K+E + KLLALK
Sbjct: 10 EIEEQGAEVRRVKGDKNSTEEAKKEAIDKLLALK 43
>U00037-3|AAA50660.1| 581|Caenorhabditis elegans Prolyl trna
synthetase protein1, isoform a protein.
Length = 581
Score = 34.7 bits (76), Expect = 0.075
Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +3
Query: 144 KIQEQGDLVRKLKAAKESNERVKEE-VSKLLALK 242
+I+EQG VR++K K S E K+E + KLLALK
Sbjct: 10 EIEEQGAEVRRVKGDKNSTEEAKKEAIDKLLALK 43
>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
protein Y48G9A.1 protein.
Length = 1725
Score = 32.3 bits (70), Expect = 0.40
Identities = 20/78 (25%), Positives = 36/78 (46%)
Frame = +3
Query: 162 DLVRKLKAAKESNERVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMTIRN 341
D+ R + A + ++R + + + L L A L ++ Q + P G D + RN
Sbjct: 282 DVGRLQREAIDESDR-RSGIGQTLVLLAGLCRQEEAEQLIRIVAPDGLSD---RAQECRN 337
Query: 342 NVLDKIITVFRRHGAECI 395
+ + + RRHGA C+
Sbjct: 338 ELRNAAVETIRRHGAACM 355
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 618 FL*SWQDCLFCTPSLYDISLK*LFYSLLNTEPKVQSNHILMKEFLHL 478
F+ + CLF TP L ++ K +F S +NT+ ++ S ++ F L
Sbjct: 34 FMSATLQCLFQTPGLAEVFTKKVFVSKVNTQSRLGSKGVISAGFASL 80
>Z81015-6|CAE17725.1| 209|Caenorhabditis elegans Hypothetical
protein C11E4.8 protein.
Length = 209
Score = 30.7 bits (66), Expect = 1.2
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -2
Query: 341 ISYCHLLWVIVSCSLWCFKS 282
I+YC ++W++ CS W +S
Sbjct: 42 IAYCEIMWIVSQCSFWTAES 61
>Z81525-1|CAB04256.1| 897|Caenorhabditis elegans Hypothetical
protein F33A8.1 protein.
Length = 897
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/75 (30%), Positives = 33/75 (44%)
Frame = +3
Query: 153 EQGDLVRKLKAAKESNERVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMT 332
E G V KL E NE V EE+ K + A + ED G + + + +
Sbjct: 415 ENGLNVFKLDPEFEKNEEVYEEIRKEIIGNADISDEDGGDELDDEEEGSDVEEAPKKTTE 474
Query: 333 IRNNVLDKIITVFRR 377
I +N D+ +T FRR
Sbjct: 475 IIDNT-DQNLTAFRR 488
>U19615-1|AAB51351.1| 897|Caenorhabditis elegans Nucampholin
protein.
Length = 897
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/75 (30%), Positives = 33/75 (44%)
Frame = +3
Query: 153 EQGDLVRKLKAAKESNERVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTRDYNPQQMT 332
E G V KL E NE V EE+ K + A + ED G + + + +
Sbjct: 415 ENGLNVFKLDPEFEKNEEVYEEIRKEIIGNADISDEDGGDELDDEEEGSDVEEAPKKTTE 474
Query: 333 IRNNVLDKIITVFRR 377
I +N D+ +T FRR
Sbjct: 475 IIDNT-DQNLTAFRR 488
>AC024781-1|AAN39662.2| 367|Caenorhabditis elegans Hypothetical
protein Y43H11AL.1 protein.
Length = 367
Score = 30.3 bits (65), Expect = 1.6
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +3
Query: 396 DTPVFELKDVLTGKYGEDSKL-IYDLKDQGGEILSLRYDLTVPLARYLAMNKITTLKRYH 572
DT E + V G+ D K I +L ++ +L+ R TV A Y +N++ YH
Sbjct: 52 DTQKSEKERVEAGRKLADLKCRIRELAEKK-TLLAERNHRTVQ-AVYTKLNELA----YH 105
Query: 573 IAKVYRRDNPAMTRGRYREFYQ-CDFDIAGVYDPMVPD 683
DNP T R R FYQ D + G Y +P+
Sbjct: 106 CKCELETDNPGSTEQRERVFYQTLDKNYRGEYQSSIPN 143
>Z70271-4|CAA94235.1| 1026|Caenorhabditis elegans Hypothetical
protein W08D2.7 protein.
Length = 1026
Score = 29.9 bits (64), Expect = 2.1
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 16/202 (7%)
Frame = +3
Query: 168 VRKLKAAKESNERVKEEVSKLLALKAQLVTEDAGPQKFTLKTPKGTR---DYNPQQMTIR 338
+ KL +AK+ R E+++ LLA + D G F T K R + ++ +
Sbjct: 28 MEKLDSAKKRQAR--EDMTNLLAN----MHNDVGVGNFDEATSKRARVEEEEEVEEARME 81
Query: 339 NNVLDKIITVFRRHGAECIDTPVFELKDVLTGKYGEDSKLIYDLKD--QGGEILSLRYDL 512
N ++ I T E P E ++ E +K D Q IL + +
Sbjct: 82 NIIVHTIRTDNENCTHEVAIPPNAEFAELRENSGTEPAKYYPFQLDAFQKQAILCIDNNQ 141
Query: 513 TVPLARYLAMNKITTLKRYHIAK--------VYRRDNPAMTRGRYREFYQCDFDIAGVYD 668
+V ++ + + K T + Y IAK +Y A++ +YRE + +F G+
Sbjct: 142 SVLVSAHTSAGK-TVVATYAIAKCLREKQRVIYTSPIKALSNQKYRELEE-EFKDVGLMT 199
Query: 669 PMV---PDAECLKVVTEILEAL 725
V PDA CL + TEIL ++
Sbjct: 200 GDVTLNPDASCLVMTTEILRSM 221
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,883,775
Number of Sequences: 27780
Number of extensions: 349674
Number of successful extensions: 972
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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