Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1280
         (791 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    24   1.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   2.5  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   3.3  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   4.3  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   4.3  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              21   9.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.9  

>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 418 YNYNSQTYYAVATLFVNNNVIYKVVV 495
           YNYN+  Y     L+ N N I ++ V
Sbjct: 104 YNYNNNNYNNYKKLYYNINYIEQIPV 129


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 286 RRHLNSYKYIYALYT*II 233
           + ++N  +YIY+LYT +I
Sbjct: 132 KNNINEAQYIYSLYTAVI 149


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -2

Query: 286 RRHLNSYKYIYALYT*II 233
           + ++N  +YIY+LYT +I
Sbjct: 132 KNNINEAQYIYSLYTAVI 149


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -3

Query: 159 SNNTHINISLSIKYEYFLHGYQVSSQSDAWFSYNGTSVKT 40
           +N T+I  S SI   YF+  Y ++ +   W   N   + T
Sbjct: 5   NNETNITNS-SITETYFVSAYNLNQEDSNWIITNSFIIFT 43


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 573 KVLINYLKYSLHRVPCEN 520
           ++L NY+K  L   PC N
Sbjct: 38  RILTNYIKCMLDEGPCTN 55


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 573 KVLINYLKYSLHRVPCEN 520
           ++L NY+K  L   PC N
Sbjct: 38  RILTNYIKCMLDEGPCTN 55


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +1

Query: 421 NYNSQTYYAVATLFVNNNVIYKVVVHYFILS 513
           N+N      +A +F+N N I +++     +S
Sbjct: 78  NFNEHVSREIAKIFLNENEINQLITECSAIS 108


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 583  NSNKGVNKLPKIFITSRALRKLL 515
            N N GVN   K  +T+  +RKL+
Sbjct: 1895 NRNYGVNARGKDGMTTEEMRKLI 1917


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,116
Number of Sequences: 438
Number of extensions: 4824
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)