Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1279
         (770 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1465 - 26729872-26730909                                         28   9.5  
03_02_0829 - 11599665-11600364,11600853-11601076,11601786-116020...    28   9.5  
01_03_0086 - 12316010-12316162,12316626-12316712,12316810-123169...    28   9.5  

>07_03_1465 - 26729872-26730909
          Length = 345

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 366 IPMPDDGHVFHLFPKMTDSGQ 428
           +  PD  H FH FP++ DSG+
Sbjct: 307 VEYPDAIHGFHAFPELADSGK 327


>03_02_0829 -
           11599665-11600364,11600853-11601076,11601786-11602000,
           11602300-11602377,11602593-11603907
          Length = 843

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 570 KKFIERLINLNKIKEQYAN 514
           KK++E  +++NK KEQY N
Sbjct: 817 KKYMELAVDINKAKEQYEN 835


>01_03_0086 -
           12316010-12316162,12316626-12316712,12316810-12316942,
           12317057-12317330,12317588-12317714,12317815-12318071,
           12319055-12319139
          Length = 371

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 309 FTCLGLIELKNKKSFNSPPIPMPDDG 386
           F+C G  ++  KK  + P +P+PD G
Sbjct: 4   FSCCGADDVGKKKKRDDPYVPIPDPG 29


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,532,955
Number of Sequences: 37544
Number of extensions: 380221
Number of successful extensions: 713
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 700
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)