Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1279
         (770 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003261-1|AAO25018.1|  569|Drosophila melanogaster LD23656p pro...    52   1e-06
AE013599-1893|AAF58247.1|  569|Drosophila melanogaster CG10105-P...    52   1e-06
AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB...    33   0.43 
AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD...    33   0.43 
BT023900-1|ABA81834.1| 1576|Drosophila melanogaster LP13775p pro...    29   5.3  
AE013599-1871|AAF58260.1|  856|Drosophila melanogaster CG13942-P...    29   5.3  

>BT003261-1|AAO25018.1|  569|Drosophila melanogaster LD23656p
           protein.
          Length = 569

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 23/56 (41%), Positives = 37/56 (66%)
 Frame = +3

Query: 165 IIFHYSIEHPEISLGSVHEYGLCIAEDDGEVDWAFPCLDANEPCSKFGFTCLGLIE 332
           + +  S+++P++ L S+  Y L + ED+ +++  FP LD  EPCSKFGF+ L L E
Sbjct: 259 VCYRTSLQYPDVPLKSLQHYALYMTEDNDDME-DFPPLDNREPCSKFGFSQLTLAE 313


>AE013599-1893|AAF58247.1|  569|Drosophila melanogaster CG10105-PA
           protein.
          Length = 569

 Score = 51.6 bits (118), Expect = 1e-06
 Identities = 23/56 (41%), Positives = 37/56 (66%)
 Frame = +3

Query: 165 IIFHYSIEHPEISLGSVHEYGLCIAEDDGEVDWAFPCLDANEPCSKFGFTCLGLIE 332
           + +  S+++P++ L S+  Y L + ED+ +++  FP LD  EPCSKFGF+ L L E
Sbjct: 259 VCYRTSLQYPDVPLKSLQHYALYMTEDNDDME-DFPPLDNREPCSKFGFSQLTLAE 313


>AE014297-3584|AAN14009.1| 3703|Drosophila melanogaster CG5794-PB,
            isoform B protein.
          Length = 3703

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 18/74 (24%), Positives = 31/74 (41%)
 Frame = +3

Query: 282  ANEPCSKFGFTCLGLIELKNKKSFNSPPIPMPDDGHVFHLFPKMTDSGQSHNNPSRHNTG 461
            + EPC +   +    ++L   K   +PP P+ D           T++     +P    T 
Sbjct: 3603 SEEPCGEASTSAAAAVKLSRPKGACTPPEPITDVNDTRCNIDTETEAEADEQSPKTSQTN 3662

Query: 462  GSQTSEAVISALRA 503
            GSQ +E+  +A  A
Sbjct: 3663 GSQQNESPPAATSA 3676


>AE014297-3583|AAF56319.2| 3912|Drosophila melanogaster CG5794-PD,
            isoform D protein.
          Length = 3912

 Score = 33.1 bits (72), Expect = 0.43
 Identities = 18/74 (24%), Positives = 31/74 (41%)
 Frame = +3

Query: 282  ANEPCSKFGFTCLGLIELKNKKSFNSPPIPMPDDGHVFHLFPKMTDSGQSHNNPSRHNTG 461
            + EPC +   +    ++L   K   +PP P+ D           T++     +P    T 
Sbjct: 3812 SEEPCGEASTSAAAAVKLSRPKGACTPPEPITDVNDTRCNIDTETEAEADEQSPKTSQTN 3871

Query: 462  GSQTSEAVISALRA 503
            GSQ +E+  +A  A
Sbjct: 3872 GSQQNESPPAATSA 3885


>BT023900-1|ABA81834.1| 1576|Drosophila melanogaster LP13775p
           protein.
          Length = 1576

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 354 NSPPIPMPDDGHVFHLFPKMTDSGQSHNNPSRHNTGGSQTS 476
           +SP  P      V H F +     Q + +PSRH+T  S  S
Sbjct: 340 HSPSYPPVHTSMVLHHFQQQQQQQQDYQHPSRHHTNQSTLS 380


>AE013599-1871|AAF58260.1|  856|Drosophila melanogaster CG13942-PA
           protein.
          Length = 856

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 354 NSPPIPMPDDGHVFHLFPKMTDSGQSHNNPSRHNTGGSQTS 476
           +SP  P      V H F +     Q + +PSRH+T  S  S
Sbjct: 278 HSPSYPPVHTSMVLHHFQQQQQQQQDYQHPSRHHTNQSTLS 318


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,912,897
Number of Sequences: 53049
Number of extensions: 659543
Number of successful extensions: 1195
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1193
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)