Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1279
         (770 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.4  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   4.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   4.2  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   5.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   5.5  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 435 CDFVQSLSSWEINETH 388
           C F+Q LSSW  +  H
Sbjct: 930 CKFLQELSSWVSDNAH 945


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -3

Query: 429 FVQSLSSWEINETHDRHRALELEDC 355
           +VQ L +W  +E  ++H    +  C
Sbjct: 109 YVQKLDTWVPHELKEKHLTQRINSC 133


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +1

Query: 127 LSFIPEHMTVKLR 165
           LS +PEH+ VK+R
Sbjct: 238 LSVLPEHVAVKMR 250


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 195 EISLGSVHEYGLCIAED 245
           EI  G+ ++YG+C A+D
Sbjct: 451 EIMSGTSNKYGVCHADD 467


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +3

Query: 195 EISLGSVHEYGLCIAED 245
           EI  G+ ++YG+C A+D
Sbjct: 451 EIMSGTSNKYGVCHADD 467


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,378
Number of Sequences: 438
Number of extensions: 4218
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)