Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1277
         (778 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z50177-7|CAA90542.3|  178|Caenorhabditis elegans Hypothetical pr...    28   8.6  

>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
           protein Y70C5A.2 protein.
          Length = 1037

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = +1

Query: 628 TYEAAQESSKTLFESAISTKSCCL 699
           ++EA  ES KT++E+A + K CC+
Sbjct: 734 SFEAITESVKTIYENAKTHKKCCI 757


>Z50177-7|CAA90542.3|  178|Caenorhabditis elegans Hypothetical
           protein F46G10.1a protein.
          Length = 178

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 265 LRTEANFFELAVVLFDVQQVCTFIYVEQXXXXXDLI*FRNS 387
           L+ EA+FF + V  + +Q+    I  EQ     D++  RNS
Sbjct: 122 LKREADFFGMEVFKYLIQETLVDIEKEQRANTNDIVDIRNS 162


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,807,367
Number of Sequences: 27780
Number of extensions: 271833
Number of successful extensions: 512
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)