Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1276
(739 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070068-1|AAH70068.1| 543|Homo sapiens headcase homolog (Droso... 101 3e-21
AL031772-1|CAB94782.1| 543|Homo sapiens RP1-225E12.1 protein. 101 3e-21
AB033496-1|BAA85333.1| 543|Homo sapiens homolog of Drosophila h... 101 3e-21
AB033492-1|BAA85322.1| 543|Homo sapiens homolog of Drosophila h... 101 3e-21
U28043-1|AAB48990.1| 834|Homo sapiens plasma membrane Na+/H+ ex... 31 3.3
BC101671-1|AAI01672.1| 834|Homo sapiens solute carrier family 9... 31 3.3
BC101669-1|AAI01670.1| 834|Homo sapiens solute carrier family 9... 31 3.3
BC120960-1|AAI20961.1| 282|Homo sapiens keratin associated prot... 30 7.5
BC120959-1|AAI20960.1| 282|Homo sapiens keratin associated prot... 30 7.5
AB076352-1|BAD01539.1| 271|Homo sapiens keratin associated prot... 30 7.5
BC120950-1|AAI20951.1| 271|Homo sapiens keratin associated prot... 30 10.0
BC120949-1|AAI20950.1| 271|Homo sapiens keratin associated prot... 30 10.0
AB076347-1|BAD01534.1| 282|Homo sapiens keratin associated prot... 30 10.0
>BC070068-1|AAH70068.1| 543|Homo sapiens headcase homolog
(Drosophila) protein.
Length = 543
Score = 101 bits (242), Expect = 3e-21
Identities = 50/121 (41%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Frame = +1
Query: 370 FSRRLDFSTF-NLLPKHKVNSYQIKIEDEGNHGN-DDTRLFILSTLAGQHKPRVSCALCK 543
F RRLD S +P+HK+N++ +++ED+ G +D R FIL+ L+ H+ V+CALC
Sbjct: 343 FLRRLDLSELLTHIPRHKLNTFHVRMEDDAQVGQGEDLRKFILAALSASHRNVVNCALCH 402
Query: 544 DTLDVFDRYPLVDGTFFLSPRQHTSSAVEV--KVEGRTQYLTCVCMGCLERCDPDRTIRC 717
L VF+++PLVDGT FLSP +H +V ++GR +L VC+ CLE I+C
Sbjct: 403 RALPVFEQFPLVDGTLFLSPSRHDEIEYDVPCHLQGRLMHLYAVCVDCLEGVHKIICIKC 462
Query: 718 R 720
+
Sbjct: 463 K 463
Score = 68.9 bits (161), Expect = 2e-11
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 7 QNLWTKKGYDLAFKACGCRCGRGHLKKDLDW 99
QN+WTKKGYDLAF+ C CRCG+GHLKKD DW
Sbjct: 161 QNMWTKKGYDLAFRFCSCRCGQGHLKKDTDW 191
>AL031772-1|CAB94782.1| 543|Homo sapiens RP1-225E12.1 protein.
Length = 543
Score = 101 bits (242), Expect = 3e-21
Identities = 50/121 (41%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Frame = +1
Query: 370 FSRRLDFSTF-NLLPKHKVNSYQIKIEDEGNHGN-DDTRLFILSTLAGQHKPRVSCALCK 543
F RRLD S +P+HK+N++ +++ED+ G +D R FIL+ L+ H+ V+CALC
Sbjct: 343 FLRRLDLSELLTHIPRHKLNTFHVRMEDDAQVGQGEDLRKFILAALSASHRNVVNCALCH 402
Query: 544 DTLDVFDRYPLVDGTFFLSPRQHTSSAVEV--KVEGRTQYLTCVCMGCLERCDPDRTIRC 717
L VF+++PLVDGT FLSP +H +V ++GR +L VC+ CLE I+C
Sbjct: 403 RALPVFEQFPLVDGTLFLSPSRHDEIEYDVPCHLQGRLMHLYAVCVDCLEGVHKIICIKC 462
Query: 718 R 720
+
Sbjct: 463 K 463
Score = 68.9 bits (161), Expect = 2e-11
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 7 QNLWTKKGYDLAFKACGCRCGRGHLKKDLDW 99
QN+WTKKGYDLAF+ C CRCG+GHLKKD DW
Sbjct: 161 QNMWTKKGYDLAFRFCSCRCGQGHLKKDTDW 191
>AB033496-1|BAA85333.1| 543|Homo sapiens homolog of Drosophila
headcase protein.
Length = 543
Score = 101 bits (242), Expect = 3e-21
Identities = 50/121 (41%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Frame = +1
Query: 370 FSRRLDFSTF-NLLPKHKVNSYQIKIEDEGNHGN-DDTRLFILSTLAGQHKPRVSCALCK 543
F RRLD S +P+HK+N++ +++ED+ G +D R FIL+ L+ H+ V+CALC
Sbjct: 343 FLRRLDLSELLTHIPRHKLNTFHVRMEDDAQVGQGEDLRKFILAALSASHRNVVNCALCH 402
Query: 544 DTLDVFDRYPLVDGTFFLSPRQHTSSAVEV--KVEGRTQYLTCVCMGCLERCDPDRTIRC 717
L VF+++PLVDGT FLSP +H +V ++GR +L VC+ CLE I+C
Sbjct: 403 RALPVFEQFPLVDGTLFLSPSRHDEIEYDVPCHLQGRLMHLYAVCVDCLEGVHKIICIKC 462
Query: 718 R 720
+
Sbjct: 463 K 463
Score = 68.9 bits (161), Expect = 2e-11
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 7 QNLWTKKGYDLAFKACGCRCGRGHLKKDLDW 99
QN+WTKKGYDLAF+ C CRCG+GHLKKD DW
Sbjct: 161 QNMWTKKGYDLAFRFCSCRCGQGHLKKDTDW 191
>AB033492-1|BAA85322.1| 543|Homo sapiens homolog of Drosophila
headcase protein.
Length = 543
Score = 101 bits (242), Expect = 3e-21
Identities = 50/121 (41%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Frame = +1
Query: 370 FSRRLDFSTF-NLLPKHKVNSYQIKIEDEGNHGN-DDTRLFILSTLAGQHKPRVSCALCK 543
F RRLD S +P+HK+N++ +++ED+ G +D R FIL+ L+ H+ V+CALC
Sbjct: 343 FLRRLDLSELLTHIPRHKLNTFHVRMEDDAQVGQGEDLRKFILAALSASHRNVVNCALCH 402
Query: 544 DTLDVFDRYPLVDGTFFLSPRQHTSSAVEV--KVEGRTQYLTCVCMGCLERCDPDRTIRC 717
L VF+++PLVDGT FLSP +H +V ++GR +L VC+ CLE I+C
Sbjct: 403 RALPVFEQFPLVDGTLFLSPSRHDEIEYDVPCHLQGRLMHLYAVCVDCLEGVHKIICIKC 462
Query: 718 R 720
+
Sbjct: 463 K 463
Score = 68.9 bits (161), Expect = 2e-11
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 7 QNLWTKKGYDLAFKACGCRCGRGHLKKDLDW 99
QN+WTKKGYDLAF+ C CRCG+GHLKKD DW
Sbjct: 161 QNMWTKKGYDLAFRFCSCRCGQGHLKKDTDW 191
>U28043-1|AAB48990.1| 834|Homo sapiens plasma membrane Na+/H+
exchanger isoform 3 protein.
Length = 834
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 107 LEQQSEQRRKRSVVDAQDRVVHYQLLQ 187
L+ QS ++R+RS+ DA+D V H+ L Q
Sbjct: 596 LDMQSLEQRRRSIRDAEDMVTHHTLQQ 622
>BC101671-1|AAI01672.1| 834|Homo sapiens solute carrier family 9
(sodium/hydrogen exchanger), member 3 protein.
Length = 834
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 107 LEQQSEQRRKRSVVDAQDRVVHYQLLQ 187
L+ QS ++R+RS+ DA+D V H+ L Q
Sbjct: 596 LDMQSLEQRRRSIRDAEDMVTHHTLQQ 622
>BC101669-1|AAI01670.1| 834|Homo sapiens solute carrier family 9
(sodium/hydrogen exchanger), member 3 protein.
Length = 834
Score = 31.5 bits (68), Expect = 3.3
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 107 LEQQSEQRRKRSVVDAQDRVVHYQLLQ 187
L+ QS ++R+RS+ DA+D V H+ L Q
Sbjct: 596 LDMQSLEQRRRSIRDAEDMVTHHTLQQ 622
>BC120960-1|AAI20961.1| 282|Homo sapiens keratin associated protein
10-1 protein.
Length = 282
Score = 30.3 bits (65), Expect = 7.5
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = -2
Query: 210 TECSGSAICSSW*CTTRSCASTTLLFLLCSDCCSRR--*PIKIFFQVPSATSAAACLECQ 37
T C + C CTT C ++ + LLC C P+ S+ A+ C
Sbjct: 208 TSCCQQSSCQPACCTTSCCRPSSSVSLLCRPVCQPACCMPVSSCCAPASSCQASCCRPAS 267
Query: 36 VVTFFC 19
V+ C
Sbjct: 268 CVSLLC 273
>BC120959-1|AAI20960.1| 282|Homo sapiens keratin associated protein
10-1 protein.
Length = 282
Score = 30.3 bits (65), Expect = 7.5
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = -2
Query: 210 TECSGSAICSSW*CTTRSCASTTLLFLLCSDCCSRR--*PIKIFFQVPSATSAAACLECQ 37
T C + C CTT C ++ + LLC C P+ S+ A+ C
Sbjct: 208 TSCCQQSSCQPACCTTSCCRPSSSVSLLCRPVCQPACCMPVSSCCAPASSCQASCCRPAS 267
Query: 36 VVTFFC 19
V+ C
Sbjct: 268 CVSLLC 273
>AB076352-1|BAD01539.1| 271|Homo sapiens keratin associated protein
protein.
Length = 271
Score = 30.3 bits (65), Expect = 7.5
Identities = 19/72 (26%), Positives = 26/72 (36%), Gaps = 2/72 (2%)
Frame = -2
Query: 210 TECSGSAICSSW*CTTRSCASTTLLFLLCSDCCSRR--*PIKIFFQVPSATSAAACLECQ 37
T C + C CTT C ++ + LLC C PI S+ A+ C
Sbjct: 197 TSCCQQSSCQPACCTTSCCRPSSSVSLLCRPICRPACCVPISSCCAPASSYQASCCRPAS 256
Query: 36 VVTFFCPQILMP 1
V+ C P
Sbjct: 257 CVSLLCRPACSP 268
>BC120950-1|AAI20951.1| 271|Homo sapiens keratin associated protein
10-5 protein.
Length = 271
Score = 29.9 bits (64), Expect = 10.0
Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = -2
Query: 210 TECSGSAICSSW*CTTRSCASTTLLFLLCSDCCSRR--*PIKIFFQVPSATSAAACLECQ 37
T C + C CTT C ++ + LLC C PI S+ A+ C
Sbjct: 197 TSCCQQSSCQPACCTTSCCRPSSSVSLLCRPICRPACCVPISSCCAPASSYQASCCRPAS 256
Query: 36 VVTFFC 19
V+ C
Sbjct: 257 CVSLLC 262
>BC120949-1|AAI20950.1| 271|Homo sapiens keratin associated protein
10-5 protein.
Length = 271
Score = 29.9 bits (64), Expect = 10.0
Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = -2
Query: 210 TECSGSAICSSW*CTTRSCASTTLLFLLCSDCCSRR--*PIKIFFQVPSATSAAACLECQ 37
T C + C CTT C ++ + LLC C PI S+ A+ C
Sbjct: 197 TSCCQQSSCQPACCTTSCCRPSSSVSLLCRPICRPACCVPISSCCAPASSYQASCCRPAS 256
Query: 36 VVTFFC 19
V+ C
Sbjct: 257 CVSLLC 262
>AB076347-1|BAD01534.1| 282|Homo sapiens keratin associated protein
protein.
Length = 282
Score = 29.9 bits (64), Expect = 10.0
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = -2
Query: 210 TECSGSAICSSW*CTTRSCASTTLLFLLCSDCCSRR--*PIKIFFQVPSATSAAACLECQ 37
T C + C CTT C ++ + LLC C P+ S+ A+ C
Sbjct: 208 TSCCQQSSCQPACCTTSCCRPSSSVSLLCRPVCRPACCMPVSSCCAPASSCQASCCRPAS 267
Query: 36 VVTFFC 19
V+ C
Sbjct: 268 CVSLLC 273
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,329,245
Number of Sequences: 237096
Number of extensions: 2709619
Number of successful extensions: 7054
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7040
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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