BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1274
(727 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 26 0.42
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 25 0.55
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 0.55
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.55
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 25 0.73
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 24 1.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 24 1.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 2.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 2.2
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 2.2
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 2.2
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 2.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.2
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 2.2
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 2.9
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 2.9
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 23 3.9
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 6.8
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 6.8
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.0
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.0
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 25.8 bits (54), Expect = 0.42
Identities = 19/119 (15%), Positives = 55/119 (46%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + N + +TK+E +++ + L + + ++L+ IL+ + + +K+
Sbjct: 16 KQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKL 75
Query: 280 GDTPLDSLPPDQLANFFSAGGAQQISSSENRPIVVKPDGSHIESRIDQDMEDDQEGAAS 456
G S PD ++ ++ + S+ P ++ + + ++ +I ++ D G ++
Sbjct: 76 GSERSKSRSPDSRDRSNTSNTSKTVILSDKGPEGIQINATELQ-KIKLEIHRDLPGKST 133
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.4 bits (53), Expect = 0.55
Identities = 20/119 (16%), Positives = 54/119 (45%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + N + +TK+E +++ + L + + ++L+ IL+ + + +K+
Sbjct: 16 KQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKL 75
Query: 280 GDTPLDSLPPDQLANFFSAGGAQQISSSENRPIVVKPDGSHIESRIDQDMEDDQEGAAS 456
G S PD ++ ++ I S P ++ + + ++ +I ++ D G ++
Sbjct: 76 GSERSKSRSPDSRDRSNTSNTSKTIILSNKGPEGIQINATELQ-KIKLEIHRDLPGKST 133
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 25.4 bits (53), Expect = 0.55
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 193 EVPDDLRQQLLSSGIL 240
E+PDDLRQ++L G L
Sbjct: 558 ELPDDLRQKVLPDGTL 573
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 25.4 bits (53), Expect = 0.55
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 193 EVPDDLRQQLLSSGIL 240
E+PDDLRQ++L G L
Sbjct: 558 ELPDDLRQKVLPDGTL 573
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 25.0 bits (52), Expect = 0.73
Identities = 19/119 (15%), Positives = 54/119 (45%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + N + +TK+E +++ + L + + ++L+ IL+ + + +K+
Sbjct: 16 KQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKL 75
Query: 280 GDTPLDSLPPDQLANFFSAGGAQQISSSENRPIVVKPDGSHIESRIDQDMEDDQEGAAS 456
G S PD ++ ++ + S P ++ + + ++ +I ++ D G ++
Sbjct: 76 GSERSKSRSPDSRDRSNTSNTSKTVILSNKGPEGIQINATELQ-KIKLEIHRDLPGKST 133
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 91 TTPKYVSSTANSVSSTPQTKKEEKKNK 171
TTPK TA + ++KE+KK++
Sbjct: 789 TTPKKERKTATTTQPVISSRKEQKKSE 815
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.8 bits (49), Expect = 1.7
Identities = 20/119 (16%), Positives = 54/119 (45%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + + + +TK+E +++ L + + Q+L+ IL+ + + +K+
Sbjct: 16 KQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKL 75
Query: 280 GDTPLDSLPPDQLANFFSAGGAQQISSSENRPIVVKPDGSHIESRIDQDMEDDQEGAAS 456
G S PD ++ ++ I S+ P ++ + + ++ +I ++ D G ++
Sbjct: 76 GSERSKSRSPDSRDKSNTSNTSKTIILSDKGPEGIQINATELQ-KIKLEIHRDLPGKST 133
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 2.2
Identities = 14/71 (19%), Positives = 33/71 (46%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + N + +TK+E +++ + L + + ++L+ IL+ + + +K+
Sbjct: 16 KQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKL 75
Query: 280 GDTPLDSLPPD 312
G S PD
Sbjct: 76 GSERSKSRSPD 86
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.4 bits (48), Expect = 2.2
Identities = 19/119 (15%), Positives = 54/119 (45%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + + + +TK+E +++ L + + Q+L+ IL+ + + +K+
Sbjct: 16 KQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKL 75
Query: 280 GDTPLDSLPPDQLANFFSAGGAQQISSSENRPIVVKPDGSHIESRIDQDMEDDQEGAAS 456
G S PD ++ ++ + S+ P ++ + + ++ +I ++ D G ++
Sbjct: 76 GSERSKSRSPDSRDRSNASNTSKTVILSDKGPEGIQINATELQ-KIKLEIHRDLPGKST 133
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.2
Identities = 14/71 (19%), Positives = 33/71 (46%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + N + +TK+E +++ + L + + ++L+ IL+ + + +K+
Sbjct: 16 KQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKL 75
Query: 280 GDTPLDSLPPD 312
G S PD
Sbjct: 76 GSERSKSRSPD 86
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.2
Identities = 14/71 (19%), Positives = 33/71 (46%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + N + +TK+E +++ + L + + ++L+ IL+ + + +K+
Sbjct: 16 KQLRNEDNKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKL 75
Query: 280 GDTPLDSLPPD 312
G S PD
Sbjct: 76 GSERSKSRSPD 86
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.4 bits (48), Expect = 2.2
Identities = 19/119 (15%), Positives = 54/119 (45%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + + + +TK+E +++ L + + Q+L+ IL+ + + +K+
Sbjct: 16 KQLRNEDSEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKL 75
Query: 280 GDTPLDSLPPDQLANFFSAGGAQQISSSENRPIVVKPDGSHIESRIDQDMEDDQEGAAS 456
G S PD ++ ++ + S+ P ++ + + ++ +I ++ D G ++
Sbjct: 76 GSERSKSRSPDSRDRSNASNTSKTVILSDKGPEGIQINATELQ-KIKLEIHRDLPGKST 133
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.2
Identities = 15/71 (21%), Positives = 32/71 (45%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + N + +TK+E +++ L + + Q+L+ IL+ + + +K+
Sbjct: 16 KQLRNEDNKIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYEIRRIREIEKL 75
Query: 280 GDTPLDSLPPD 312
G S PD
Sbjct: 76 GSERSKSRSPD 86
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.4 bits (48), Expect = 2.2
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 403 IESRIDQDMEDDQEGAASENVPSYVAP 483
+ S + Q + +GAAS N+PS + P
Sbjct: 236 VTSPLSQQQQAAPQGAASANLPSPLYP 262
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.0 bits (47), Expect = 2.9
Identities = 15/71 (21%), Positives = 32/71 (45%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + N + +TK+E +++ L + + Q+L+ IL+ + + +K+
Sbjct: 16 KQLRNEDNEIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKL 75
Query: 280 GDTPLDSLPPD 312
G S PD
Sbjct: 76 GSERSKSRSPD 86
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.0 bits (47), Expect = 2.9
Identities = 15/71 (21%), Positives = 32/71 (45%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + N + +TK+E +++ L + + Q+L+ IL+ + + +K+
Sbjct: 16 KQLRNEDNKIDLRSRTKEERLQHRREAWLIQQEREREHQRLMKKMILEYELRRIREIEKL 75
Query: 280 GDTPLDSLPPD 312
G S PD
Sbjct: 76 GSERSKSRSPD 86
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -3
Query: 530 FSDRKWTTFISTACFGG 480
F DRK+ + AC GG
Sbjct: 435 FKDRKYLYMLMEACLGG 451
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.8 bits (44), Expect = 6.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 482 RRNKQLK*KLSIFDPKTPEGQKIADD 559
+ N + K +LS F+ TP QKI D
Sbjct: 38 KNNIETKNQLSPFNIDTPNRQKILKD 63
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.8 bits (44), Expect = 6.8
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 6/47 (12%)
Frame = +1
Query: 85 GPTTPKYVSSTANSV------SSTPQTKKEEKKNKPTIELPDEVPDD 207
GP TP V +T+N+ ++T T++ K+ + E D+ DD
Sbjct: 237 GPATPSAVVATSNATAAMTTGTTTIPTRRLRKRRQNDGEGADDRDDD 283
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 9.0
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +1
Query: 385 KPDGSHIESRIDQDMEDDQEGAASENVPSYVAPPKQAVEMKVV 513
+P HI S ID D + A + P PP + + +V
Sbjct: 1328 RPLSEHIYSSIDSDYSTLERTAWRQQQPPPPPPPPSSGQAYLV 1370
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 9.0
Identities = 13/71 (18%), Positives = 33/71 (46%)
Frame = +1
Query: 100 KYVSSTANSVSSTPQTKKEEKKNKPTIELPDEVPDDLRQQLLSSGILDNADISVLDYDKV 279
K + + + + +TK+E +++ + L + + ++L+ IL+ + + +K+
Sbjct: 16 KQLRNEDSKIDLRSRTKEERLQHRREVWLIQQEREREHERLMKKMILEYELRRIREIEKL 75
Query: 280 GDTPLDSLPPD 312
G S PD
Sbjct: 76 GSERSKSRSPD 86
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,212
Number of Sequences: 438
Number of extensions: 3749
Number of successful extensions: 38
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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