Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1271
         (386 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    54   1e-06
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    36   0.27 
UniRef50_Q18Z14 Cluster: PEP-utilising enzyme, mobile region; n=...    31   7.7  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 53.6 bits (123), Expect = 1e-06
 Identities = 25/38 (65%), Positives = 27/38 (71%)
 Frame = -3

Query: 375 FFLLRWVDELTAHLMLSGYWSP*TSTT*MRHPSLRYKF 262
           F LLRWVDELTAHL+LSGYWSP         P+ RYKF
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSPRHLYDVNAPPTSRYKF 191


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.9 bits (79), Expect = 0.27
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = -1

Query: 176 WYLPVRTHKRSYHQ*EVIY 120
           WYLP RTHKRSYH+ +  Y
Sbjct: 572 WYLPARTHKRSYHRYQCSY 590


>UniRef50_Q18Z14 Cluster: PEP-utilising enzyme, mobile region; n=2;
           Desulfitobacterium hafniense|Rep: PEP-utilising enzyme,
           mobile region - Desulfitobacterium hafniense (strain
           DCB-2)
          Length = 560

 Score = 31.1 bits (67), Expect = 7.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
 Frame = +3

Query: 15  EFFLWLSLADDQIMLSDIH--LIMSIPTLHT 101
           EF  WL LA+    LS+IH  L+M++P  HT
Sbjct: 314 EFGTWLELAEQVQPLSEIHDYLLMTVPLCHT 344


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 384,142,997
Number of Sequences: 1657284
Number of extensions: 7138984
Number of successful extensions: 15501
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15495
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)