Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1271
(386 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 1.2
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 1.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 1.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.6
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 3.7
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 6.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 6.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 6.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 6.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 6.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 6.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 6.5
DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II lar... 21 6.5
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 20 8.6
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 20 8.6
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 20 8.6
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.0 bits (47), Expect = 1.2
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = -1
Query: 176 WYLPVRTHKRSYHQ*EVIYPS 114
+Y + H++ Y++ E+IYP+
Sbjct: 428 YYHSYKMHQKPYNKDEIIYPN 448
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 23.0 bits (47), Expect = 1.2
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = -1
Query: 176 WYLPVRTHKRSYHQ*EVIYPS 114
+Y + H++ Y++ E+IYP+
Sbjct: 428 YYHSYKMHQKPYNKDEIIYPN 448
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 1.6
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 31 CHWQMIKLCCQTYI*LCQYLHYTHTL 108
C W ++ C+ Y ++L+ HTL
Sbjct: 283 CKWPGCEVICEDYQAFLKHLNTEHTL 308
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 1.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 202 LHGRNRQGGGTYPCGLTRGPTTNEKSSTHLRV 107
L+G NR+ G Y C + R ++S L++
Sbjct: 386 LNGINREDRGMYQCIVRRSEGDTAQASAELQL 417
Score = 20.2 bits (40), Expect = 8.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 235 YPTLQTETH*LLHGRNRQGGGTYPCGLT 152
Y T T + LLH ++ GG G T
Sbjct: 1411 YVTSSTSSSILLHWKSGHNGGASLTGYT 1438
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 1.6
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -2
Query: 202 LHGRNRQGGGTYPCGLTRGPTTNEKSSTHLRV 107
L+G NR+ G Y C + R ++S L++
Sbjct: 386 LNGINREDRGMYQCIVRRSEGDTAQASAELQL 417
Score = 20.2 bits (40), Expect = 8.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -2
Query: 235 YPTLQTETH*LLHGRNRQGGGTYPCGLT 152
Y T T + LLH ++ GG G T
Sbjct: 1407 YVTSSTSSSILLHWKSGHNGGASLTGYT 1434
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 3.7
Identities = 7/28 (25%), Positives = 16/28 (57%)
Frame = +2
Query: 29 VVTGR*SNYAVRHTSNYVNTYTTHIHYS 112
+++ +NY + +NY N Y + +Y+
Sbjct: 314 IISSLSNNYKYSNYNNYNNNYNNYNNYN 341
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 29 VVTGR*SNYAVRHTSNYVNTYTTH 100
+++ +NY + +NY N Y T+
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTN 104
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 29 VVTGR*SNYAVRHTSNYVNTYTTH 100
+++ +NY + +NY N Y T+
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTN 104
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 29 VVTGR*SNYAVRHTSNYVNTYTTH 100
+++ +NY + +NY N Y T+
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTN 104
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 29 VVTGR*SNYAVRHTSNYVNTYTTH 100
+++ +NY + +NY N Y T+
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTN 104
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 29 VVTGR*SNYAVRHTSNYVNTYTTH 100
+++ +NY + +NY N Y T+
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTN 104
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 29 VVTGR*SNYAVRHTSNYVNTYTTH 100
+++ +NY + +NY N Y T+
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTN 104
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +2
Query: 29 VVTGR*SNYAVRHTSNYVNTYTTH 100
+++ +NY + +NY N Y T+
Sbjct: 81 IISSLSNNYKYSNYNNYNNNYNTN 104
>DQ069332-1|AAZ32217.1| 296|Apis mellifera RNA polymerase II large
subunit protein.
Length = 296
Score = 20.6 bits (41), Expect = 6.5
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = +3
Query: 21 FLWLSLADDQIMLSDIHLIMSI 86
+ W+S D ++M+ L+M I
Sbjct: 79 YKWISPGDTKVMVEHGELVMGI 100
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 381 FFFFLLRWVDELTAHLM 331
FF FLL W T L+
Sbjct: 288 FFLFLLAWTPYATVALI 304
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 20.2 bits (40), Expect = 8.6
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -3
Query: 381 FFFFLLRWVDELTAHLM 331
FF FLL W T L+
Sbjct: 288 FFLFLLAWTPYATVALI 304
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 20.2 bits (40), Expect = 8.6
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = -2
Query: 337 PDVKWLLEPIDIYN 296
P++ WL + I++Y+
Sbjct: 52 PEITWLKDGIELYH 65
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,739
Number of Sequences: 438
Number of extensions: 2223
Number of successful extensions: 19
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9391092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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