Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1268
(767 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC336.14c |ppk26||serine/threonine protein kinase Ppk26|Schizo... 30 0.32
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 30 0.42
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.55
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 28 1.3
SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 3.9
SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 3.9
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 26 5.2
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 6.8
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 26 6.8
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 6.8
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi... 25 9.0
SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces pomb... 25 9.0
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 25 9.0
>SPBC336.14c |ppk26||serine/threonine protein kinase
Ppk26|Schizosaccharomyces pombe|chr 2|||Manual
Length = 589
Score = 30.3 bits (65), Expect = 0.32
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +3
Query: 93 AASVSYSSI-STPIN--GKTIINPSTEVRRP-INFYKT-VAPAPVHETFSDHNNAGNAYF 257
AAS S+ + + P+ G + P ++ + ++ +T VA +P + +NNA
Sbjct: 82 AASASFQPVRALPVKAAGAAVFVPKSQEKSLFLSRERTPVALSPGSHAINPYNNASMLVN 141
Query: 258 SSLHKQNLDYYNHQNYDTPVYLNTYQHEP 344
H + YY QN P N Y +P
Sbjct: 142 EPFHDDSGVYYTRQNQFKPTLYNLYNPQP 170
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 29.9 bits (64), Expect = 0.42
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +3
Query: 213 HETFSDHNNAGNAYFSSLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLV 392
HE +H++ N +HK N + +H++ + L ++ + HEN N+HG +
Sbjct: 534 HENSQEHHHEHNHNHDHIHKYN-EKCDHES----ISLQNLDNDHHCHHHHENHNMHGIFL 588
Query: 393 HSVS 404
H ++
Sbjct: 589 HIIA 592
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 29.5 bits (63), Expect = 0.55
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRR 173
+ +++++T P +S +S STPI T++N ST + R
Sbjct: 552 ITSSTVVNTSTPITSSSVLNS-STPITSSTVVNTSTPITR 590
Score = 29.5 bits (63), Expect = 0.55
Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 6/151 (3%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDH 233
+ +++++T P +S +S STPI T++N ST PI TV T S
Sbjct: 1152 ITSSTVVNTSTPITSSTVVNS-STPITSSTVVNTST----PIT-SSTVVNTSTPITSSTV 1205
Query: 234 NNAGNAYFSS--LHKQN-LDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVS 404
N+ SS L+ + + N TP+ ++ + +N P+ S
Sbjct: 1206 VNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPI---TS 1262
Query: 405 TLAAHKSIPVTFAT---HSIPYSKTSYLSDT 488
+ + S P+T +T SIP + +S L+ +
Sbjct: 1263 STVVNSSTPITSSTALNTSIPITSSSVLNSS 1293
Score = 29.5 bits (63), Expect = 0.55
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 AVARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
A+ +SI+++ P +S +S STPI T++N ST +
Sbjct: 3347 AITSSSILNSSTPVTSSSVLNS-STPITSSTVVNSSTPI 3384
Score = 29.1 bits (62), Expect = 0.73
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 AVARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
A+ +SI+++ P +S +S STPI T++N ST +
Sbjct: 3119 AITSSSILNSSTPITSSSILNS-STPITSSTVVNSSTPI 3156
Score = 28.7 bits (61), Expect = 0.97
Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 2/143 (1%)
Frame = +3
Query: 87 PPAASVSYSSISTPINGKTIINPSTEVRRPINFYKTV-APAPVHETFSDHNNAGNAYFSS 263
PP S + + STPI T++N ST PI V + P+ + + + + S
Sbjct: 1654 PPITSSTVVNSSTPITSSTVVNTST----PITSSTVVNSSTPITSSTALNTSTPITSSSV 1709
Query: 264 LHKQN-LDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIPVTF 440
L+ + N TP+ +T + +N P+ S+ A + S P+T
Sbjct: 1710 LNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPI---TSSTALNTSTPIT- 1765
Query: 441 ATHSIPYSKTSYLSDTRSAPTEP 509
+ S+ S T S T + P
Sbjct: 1766 -SSSVLNSSTPITSSTALNTSTP 1787
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S+++T P +S +S STPI T++N ST +
Sbjct: 1992 ITSSSVLNTSTPITSSSVLNS-STPITSSTVVNTSTPI 2028
Score = 28.7 bits (61), Expect = 0.97
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +++++T P +S +S STPI T++N ST +
Sbjct: 2256 ITSSTVVNTSTPITSSTVVNS-STPITSSTVVNTSTPI 2292
Score = 28.7 bits (61), Expect = 0.97
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 51 AVARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
A+ +S++++ P +S +S STPI T++N ST +
Sbjct: 3227 AITSSSVLNSSTPITSSSVLNS-STPITSSTVVNTSTPI 3264
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +++++T P +S +S STPI T++N ST +
Sbjct: 2388 ITSSTVVNTSTPITSSSVLNS-STPITSSTVVNTSTSI 2424
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +++++T P +S +S STPI T++N ST +
Sbjct: 1320 ITSSTVVNTSTPITSSSVLNS-STPITSSTVVNSSTPI 1356
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S +S STPI T++N ST +
Sbjct: 1332 ITSSSVLNSSTPITSSTVVNS-STPITSSTVVNTSTPI 1368
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +++++T P +S +S STPI T++N ST +
Sbjct: 1440 ITSSTVVNTSTPITSSSVLNS-STPITSSTVVNTSTPI 1476
Score = 27.9 bits (59), Expect = 1.7
Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRPINFYKTV-APAPVHETFSD 230
+ +S++++ P +S +S STPI T++N ST PI + + P+ + +
Sbjct: 2112 ITSSSVLNSSTPITSSSVLNS-STPITSSTVVNSST----PITSSSVLNSSTPITSSTAL 2166
Query: 231 HNNAGNAYFSSLHKQN-LDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVST 407
+ + S L+ + N TP+ +T + +N P+ S+
Sbjct: 2167 NTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPI---TSS 2223
Query: 408 LAAHKSIPVTFAT---HSIPYSKTSYLSDT 488
+ S P+T +T S P + +S L+ +
Sbjct: 2224 TVVNSSTPITSSTVLNSSTPITSSSVLNSS 2253
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +++++T P +S +S STPI T++N ST +
Sbjct: 2328 ITSSTVVNTSTPITSSSVLNS-STPITSSTVVNTSTPI 2364
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +++++T P +S +S STPI T++N ST +
Sbjct: 2664 ITSSTVVNTSTPITSSSVLNS-STPITSSTVVNTSTPI 2700
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +++++T P +S +S STPI T++N ST +
Sbjct: 2736 ITSSTVVNTSTPITSSSVLNS-STPITSSTVVNTSTPI 2772
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +++++T P +S +S STPI T++N ST +
Sbjct: 2892 ITSSTVVNTSTPITSSSVLNS-STPITSSTVVNTSTPI 2928
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +++++T P +S +S STPI T++N ST +
Sbjct: 2988 ITSSTVVNTSTPITSSSVLNS-STPITSSTVVNTSTPI 3024
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +++++T P +S +S STPI T++N ST +
Sbjct: 3252 ITSSTVVNTSTPITSSSVLNS-STPITSSTVVNTSTPI 3288
Score = 27.5 bits (58), Expect = 2.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +SI++T P +S +S STPI +I+N ST +
Sbjct: 396 ITSSSILNTSTPITSSSVLNS-STPITSSSILNSSTPI 432
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +SI+++ P +S +S STPI T++N ST +
Sbjct: 756 ITSSSILNSSTPITSSSVLNS-STPITSSTVVNTSTPI 792
Score = 27.5 bits (58), Expect = 2.2
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 51 AVARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
A+ ++ ++T P +S +S STPI T++N ST +
Sbjct: 1019 AITSSTALNTSTPITSSSVLNS-STPITSSTVVNTSTPI 1056
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +++++T P +S ++ STPI T++N ST +
Sbjct: 1356 ITSSTVVNTSTPITSSTVVNT-STPITSSTVVNSSTPI 1392
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 51 AVARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
++ +S++++ P +S +S STPI T++N ST +
Sbjct: 2423 SITSSSVLNSSTPITSSSVLNS-STPITSSTVVNSSTPI 2460
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S +S STPI T++N ST +
Sbjct: 456 ITSSSVLNSSTPITSSSVLNS-STPITSSTVVNTSTPI 492
Score = 27.1 bits (57), Expect = 3.0
Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 6/151 (3%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDH 233
+ +S++++ P +S ++ STPI T++N ST PI TV T S
Sbjct: 1404 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSST----PIT-SSTVVNTSTPITSSSV 1457
Query: 234 NNAGNAYFSSL---HKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVS 404
N+ SS + N TP+ +T + +N P+ S
Sbjct: 1458 LNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPI---TS 1514
Query: 405 TLAAHKSIPVTFAT---HSIPYSKTSYLSDT 488
+ + S P+T +T S P + +S L+ +
Sbjct: 1515 STVVNSSTPITSSTVLNTSTPITSSSVLNSS 1545
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S +S STPI T++N ST +
Sbjct: 1536 ITSSSVLNSSTPITSSSVLNS-STPITSSTVVNTSTPI 1572
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S +S STPI T++N ST +
Sbjct: 1920 ITSSSVLNSSTPITSSSVLNS-STPITSSTVVNSSTPI 1956
Score = 27.1 bits (57), Expect = 3.0
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ ++++++ P +S + ++ STPI T++N ST +
Sbjct: 3408 ITSSTVVNSSTPITSSTALNT-STPITSSTVVNSSTPI 3444
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 468 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 504
Score = 26.6 bits (56), Expect = 3.9
Identities = 36/136 (26%), Positives = 53/136 (38%), Gaps = 3/136 (2%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLH 269
P S S + STPI T++N ST PI TV + T S N+ SS
Sbjct: 815 PITSSSVLNSSTPITSSTVVNTST----PIT-SSTVVNSSTPITSSSVLNSSTPITSSTA 869
Query: 270 KQN---LDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIPVTF 440
+ + N TP+ +T + +N P+ S+ A + S P+T
Sbjct: 870 LNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPI---TSSTALNTSTPIT- 925
Query: 441 ATHSIPYSKTSYLSDT 488
+ S+ S T S T
Sbjct: 926 -SSSVLNSSTPITSST 940
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 1032 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 1068
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 1140 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 1176
Score = 26.6 bits (56), Expect = 3.9
Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Frame = +3
Query: 63 ASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNA 242
+S + P S + + STPI T++N ST PI TV + T S N
Sbjct: 1166 SSTVVNSSTPITSSTVVNTSTPITSSTVVNTST----PIT-SSTVVNSSTPITSSTVLNT 1220
Query: 243 GNAYFSS--LHKQN-LDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLA 413
SS L+ + + N TP+ ++ + +N P+ S+ A
Sbjct: 1221 STPITSSSVLNSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNSSTPI---TSSTA 1277
Query: 414 AHKSIPVTFATHSIPYSKTSYLSDT 488
+ SIP+T + S+ S T S T
Sbjct: 1278 LNTSIPIT--SSSVLNSSTPITSST 1300
Score = 26.6 bits (56), Expect = 3.9
Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 3/152 (1%)
Frame = +3
Query: 63 ASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNA 242
+S + P S + + STPI T++N ST PI TV + T S N
Sbjct: 1478 SSTVVNSSTPITSSTVVNTSTPITSSTVVNTST----PIT-SSTVVNSSTPITSSTVLNT 1532
Query: 243 GNAYFSS--LHKQN-LDYYNHQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLA 413
SS L+ + + N TP+ +T + +N P+ S+ A
Sbjct: 1533 STPITSSSVLNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPI---TSSTA 1589
Query: 414 AHKSIPVTFATHSIPYSKTSYLSDTRSAPTEP 509
+ S P+T + S+ S T S T + P
Sbjct: 1590 LNTSTPIT--SSSVLNSSTPITSSTALNTSTP 1619
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 1812 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 1848
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 2004 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 2040
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 2244 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 2280
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 2484 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 2520
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 2532 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 2568
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 2580 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 2616
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 2676 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 2712
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 2784 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 2820
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 2904 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 2940
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 3000 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 3036
Score = 26.6 bits (56), Expect = 3.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 54 VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+ +S++++ P +S ++ STPI T++N ST +
Sbjct: 3264 ITSSSVLNSSTPITSSTVVNT-STPITSSTVVNSSTPI 3300
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 51 AVARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
A+A +SI+++ P +S +S STPI+ T+I S +
Sbjct: 3455 AIASSSILNSSTPITSSSVLNS-STPISSSTVITSSVVI 3492
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEV 167
P S S + STPI T++N ST +
Sbjct: 1103 PITSSSVLNSSTPITSSTVVNTSTPI 1128
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEV 167
P S S + STPI T++N ST +
Sbjct: 1139 PITSSSVLNSSTPITSSTVVNTSTPI 1164
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEV 167
P S S + STPI T++N ST +
Sbjct: 1403 PITSSSVLNSSTPITSSTVVNTSTPI 1428
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEV 167
P S S + STPI T++N ST +
Sbjct: 1811 PITSSSVLNSSTPITSSTVVNTSTPI 1836
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEV 167
P S S + STPI T++N ST +
Sbjct: 2243 PITSSSVLNSSTPITSSTVVNTSTPI 2268
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEV 167
P S S + STPI T++N ST +
Sbjct: 2315 PITSSSVLNSSTPITSSTVVNTSTPI 2340
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEV 167
P S S + STPI T++N ST +
Sbjct: 2483 PITSSSVLNSSTPITSSTVVNTSTPI 2508
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEV 167
P S S + STPI T++N ST +
Sbjct: 2531 PITSSSVLNSSTPITSSTVVNTSTPI 2556
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEV 167
P S S + STPI T++N ST +
Sbjct: 2579 PITSSSVLNSSTPITSSTVVNTSTPI 2604
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEV 167
P S S + STPI T++N ST +
Sbjct: 2723 PITSSSVLNSSTPITSSTVVNTSTPI 2748
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEV 167
P S S + STPI T++N ST +
Sbjct: 2783 PITSSSVLNSSTPITSSTVVNTSTPI 2808
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEV 167
P S S + STPI T++N ST +
Sbjct: 3395 PITSSSVLNSSTPITSSTVVNSSTPI 3420
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 63 ASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+S + P S + + STPI T++N ST +
Sbjct: 1346 SSTVVNSSTPITSSTVVNTSTPITSSTVVNTSTPI 1380
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 63 ASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+S + P S + + STPI T++N ST +
Sbjct: 1658 SSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPI 1692
Score = 25.8 bits (54), Expect = 6.8
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 63 ASIIDTDYPPAASVSYSSISTPINGKTIINPSTEV 167
+S + P S + + STPI T++N ST +
Sbjct: 2270 SSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPI 2304
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 51 AVARASIIDTDYPPAASVSYSSISTP 128
A A S+ID YPPA + Y S++ P
Sbjct: 360 AGATFSVIDPAYPPARQIIYLSVAKP 385
>SPCC1919.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 256
Score = 26.6 bits (56), Expect = 3.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -1
Query: 374 VDIFVWIKSDRFVLICVQIYW 312
V +F+WI +D +L+ +YW
Sbjct: 72 VSLFLWILADPAILLVQSVYW 92
>SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 3.9
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +3
Query: 201 PAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQN----YDTPVYLN----TYQHEPIGFN 356
P H ++ +N++ + Y+ H+Q YY + Y++P +++ + QH P+
Sbjct: 463 PIETHYSYESNNSSFSPYYHKRHRQISPYYPTSSVYGVYESPPHMSDSRISRQHMPLTHT 522
Query: 357 PHE 365
+E
Sbjct: 523 TYE 525
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 26.2 bits (55), Expect = 5.2
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +3
Query: 150 NPSTEVRRPINFYKTVAPAPVHETFSD-----HNNAGNAYFSSLHKQNLDYYNHQN-YDT 311
+P++ R + Y TV +P T+ N+A +SS D ++ N DT
Sbjct: 78 HPASINSRRVASY-TVQSSPSRTTYRQLPNEPQNSAAYTTYSSFPNALFDDFSPNNPLDT 136
Query: 312 PVYLNT---YQHEPIGFNP--HENINVHGPLVHSVSTLAAHKSIPVTFATHSIPYSKTSY 476
+L + Q+ F P ++ G LVH + +P + ++HS PYS TS
Sbjct: 137 DPFLTSPGNKQNTVDSFRPLPETPVSPGGSLVHPLP----RPPLPSSVSSHSSPYSTTSS 192
Query: 477 LS 482
S
Sbjct: 193 TS 194
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 6.8
Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Frame = +3
Query: 51 AVARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRPINFYKTV-APAPVHETFS 227
A AS T P + + ++ ++P NG PST++ +T A S
Sbjct: 219 AKPEASSTATKGPRPTTSASNTNTSPANGAPTNKPSTDINTTDPATQTTQVSASNSPALS 278
Query: 228 DHNNAGNAYFSSLHKQNLDYYNHQNYDT-----PVYLNTYQHEPIGFNPHENIN 374
+ N S + + ++ ++YD P Y N Y H GFN + + N
Sbjct: 279 GSSTPSNTSSRSNRQNHGNFSEKRHYDRYGNSHPSY-NKYSHYQHGFNYNNSGN 331
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 25.8 bits (54), Expect = 6.8
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 8/82 (9%)
Frame = +3
Query: 276 NLDYYN--HQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHSVSTLAAHKSIPV----- 434
N+DY ++ ++ + Y H+ I +ENI + PL H + IP+
Sbjct: 811 NVDYVRGVFPGDNSTIWYDWYDHKVIYRQHNENITLSAPLTHINVAIRGGNIIPMQKPSL 870
Query: 435 -TFATHSIPYSKTSYLSDTRSA 497
T T PY L R A
Sbjct: 871 TTHETKQNPYDLLVALDSDRKA 892
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 6.8
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 201 PAPVHETFSDHNNAGNAYFS-SLHKQNLDYYNHQNYDTPVYLNTYQHEPIGFNPHENINV 377
P+P E + NAY + S + LD + T + T++HE HE ++
Sbjct: 189 PSPEVEKIETSTSVENAYITNSQYNDTLDMEDQ----TSDLITTFEHENEDHEVHEVPSI 244
Query: 378 HG 383
HG
Sbjct: 245 HG 246
>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
Ran1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 470
Score = 25.4 bits (53), Expect = 9.0
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAY 254
P VS + TP N ++P+T + PI+ ++ P+ + HNNA N+Y
Sbjct: 367 PTIPVSLQ-VLTP-NSSLKVDPTTPLTAPIHATESFWPSAAAAAAAVHNNA-NSY 418
>SPBC3F6.04c |||U3 snoRNP protein Nop14 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 827
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 508 HHFLLKVANLLDYQHIPLILLCRICHQNQVPYILRFLVLNLTIFIH 645
HH L N ++ +ILL I H + P I L+ +LT +H
Sbjct: 442 HHVKLHPDNKSRLENFSVILLQHILHLTRQPMISMELLEHLTEHLH 487
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +3
Query: 57 ARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVH 215
A ++ +D AASV +S NG ++N +E + K +P H
Sbjct: 13 ANSTEVDAAEQDAASVKINSTRASPNGSDLLNDDSEAAKITTNEKQSSPVDSH 65
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,112,291
Number of Sequences: 5004
Number of extensions: 67300
Number of successful extensions: 333
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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