BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1268
(767 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p pro... 33 0.57
AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p pro... 33 0.57
AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB... 33 0.57
X55393-1|CAA39067.1| 659|Drosophila melanogaster S59 protein pr... 32 0.75
AE014297-3018|AAF55901.3| 659|Drosophila melanogaster CG6534-PA... 32 0.75
AE014296-1276|AAF50547.1| 197|Drosophila melanogaster CG7548-PA... 32 0.99
AY089340-1|AAL90078.1| 790|Drosophila melanogaster AT15733p pro... 31 1.3
AE013599-3474|AAM71125.1| 790|Drosophila melanogaster CG3622-PA... 31 1.3
AE013599-3473|AAF46905.1| 1091|Drosophila melanogaster CG3622-PB... 31 1.3
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P... 31 2.3
AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-P... 31 2.3
AY071659-1|AAL49281.1| 436|Drosophila melanogaster RE74364p pro... 29 7.0
AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellula... 29 7.0
AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellula... 29 7.0
AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellula... 29 7.0
AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-P... 29 7.0
AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-P... 29 7.0
BT023650-1|AAY85050.1| 97|Drosophila melanogaster IP05304p pro... 29 9.3
AL121806-10|CAB58085.1| 692|Drosophila melanogaster EG:BACR42I1... 29 9.3
AF541948-1|AAN34650.1| 427|Drosophila melanogaster gag protein ... 29 9.3
AE014298-161|AAF45593.2| 436|Drosophila melanogaster CG11381-PA... 29 9.3
AE014134-3571|AAF57245.1| 97|Drosophila melanogaster CG10834-P... 29 9.3
AE014134-584|AAF51125.4| 436|Drosophila melanogaster CG33282-PA... 29 9.3
>AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p
protein.
Length = 510
Score = 32.7 bits (71), Expect = 0.57
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +3
Query: 45 YLAVARASIIDTDYPPA----ASVSYSSIS-TPING---KTIINPSTEVRRPINFYKTVA 200
+L+V RAS++ D PP ++ YS + P+NG T + S+ P T A
Sbjct: 399 WLSVNRASVLAIDPPPCGINEVAIKYSILPILPLNGISTATTSSSSSAAATPTPIASTSA 458
Query: 201 PAPVHETFSDHNNAGNAYFSSL 266
A ++ + NN G Y +L
Sbjct: 459 AASATKSAASTNNCGKLYLCNL 480
>AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p
protein.
Length = 358
Score = 32.7 bits (71), Expect = 0.57
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +3
Query: 45 YLAVARASIIDTDYPPA----ASVSYSSIS-TPING---KTIINPSTEVRRPINFYKTVA 200
+L+V RAS++ D PP ++ YS + P+NG T + S+ P T A
Sbjct: 247 WLSVNRASVLAIDPPPCGINEVAIKYSILPILPLNGISTATTSSSSSAAATPTPIASTSA 306
Query: 201 PAPVHETFSDHNNAGNAYFSSL 266
A ++ + NN G Y +L
Sbjct: 307 AASATKSAASTNNCGKLYLCNL 328
>AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB
protein.
Length = 680
Score = 32.7 bits (71), Expect = 0.57
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +3
Query: 45 YLAVARASIIDTDYPPA----ASVSYSSIS-TPING---KTIINPSTEVRRPINFYKTVA 200
+L+V RAS++ D PP ++ YS + P+NG T + S+ P T A
Sbjct: 569 WLSVNRASVLAIDPPPCGINEVAIKYSILPILPLNGISTATTSSSSSAAATPTPIASTSA 628
Query: 201 PAPVHETFSDHNNAGNAYFSSL 266
A ++ + NN G Y +L
Sbjct: 629 AASATKSAASTNNCGKLYLCNL 650
>X55393-1|CAA39067.1| 659|Drosophila melanogaster S59 protein
protein.
Length = 659
Score = 32.3 bits (70), Expect = 0.75
Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +3
Query: 246 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQH-EPIGFNPHENINVHGPLVHSVSTLAAHK 422
N F + +Q++ ++ HQ++ P + +++QH P +PH + + H V + ++
Sbjct: 191 NPQFLAAAQQHMHHHQHQHHQHPAHPHSHQHPHP---HPHPHPHPHPSAVFHLRAPSSSS 247
Query: 423 SIPVTFATHSI-PYSKTSYLSDTRSAP 500
+ P + AT + P + + SD + +P
Sbjct: 248 TAPPSPATSPLSPPTSPAMHSDQQMSP 274
>AE014297-3018|AAF55901.3| 659|Drosophila melanogaster CG6534-PA
protein.
Length = 659
Score = 32.3 bits (70), Expect = 0.75
Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = +3
Query: 246 NAYFSSLHKQNLDYYNHQNYDTPVYLNTYQH-EPIGFNPHENINVHGPLVHSVSTLAAHK 422
N F + +Q++ ++ HQ++ P + +++QH P +PH + + H V + ++
Sbjct: 191 NPQFLAAAQQHMHHHQHQHHQHPAHPHSHQHPHP---HPHPHPHPHPSAVFHLRAPSSSS 247
Query: 423 SIPVTFATHSI-PYSKTSYLSDTRSAP 500
+ P + AT + P + + SD + +P
Sbjct: 248 TAPPSPATSPLSPPTSPAMHSDQQMSP 274
>AE014296-1276|AAF50547.1| 197|Drosophila melanogaster CG7548-PA
protein.
Length = 197
Score = 31.9 bits (69), Expect = 0.99
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +3
Query: 597 AVYPKISGVKSYD----IYSPPINTAAASYESHPSLKNTLTYSEAPLVSHLSFTGHGASY 764
+VY + + V+SY + +P + A Y P++ + YS A VSH+SF G G Y
Sbjct: 139 SVYHQPAQVQSYHQPGHVEAPSVYQQNAHYSHQPAV---IHYSPAETVSHMSFDGFGTHY 195
>AY089340-1|AAL90078.1| 790|Drosophila melanogaster AT15733p
protein.
Length = 790
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 377 SRTLGTLCLHTSCTQVYSCDLRNPFYSLFQNVLLIGHSIGPN 502
S+ +G + CT +YSC + + F++V ++ H IG N
Sbjct: 107 SQVVGMATVKGMCTSIYSCTINEAKH--FESVFVVAHEIGHN 146
>AE013599-3474|AAM71125.1| 790|Drosophila melanogaster CG3622-PA,
isoform A protein.
Length = 790
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 377 SRTLGTLCLHTSCTQVYSCDLRNPFYSLFQNVLLIGHSIGPN 502
S+ +G + CT +YSC + + F++V ++ H IG N
Sbjct: 107 SQVVGMATVKGMCTSIYSCTINEAKH--FESVFVVAHEIGHN 146
>AE013599-3473|AAF46905.1| 1091|Drosophila melanogaster CG3622-PB,
isoform B protein.
Length = 1091
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 377 SRTLGTLCLHTSCTQVYSCDLRNPFYSLFQNVLLIGHSIGPN 502
S+ +G + CT +YSC + + F++V ++ H IG N
Sbjct: 408 SQVVGMATVKGMCTSIYSCTINEAKH--FESVFVVAHEIGHN 447
>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
protein.
Length = 2938
Score = 30.7 bits (66), Expect = 2.3
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Frame = +3
Query: 72 IDTDYPPAAS------VSYSSISTPINGKTIINPSTEVRRPI-NFYKTVAPAPVHETFSD 230
IDT YPP S V ++ + P+ + PI NF+++ +PA VH D
Sbjct: 1836 IDTIYPPRRSNGLKPNVQATAAAYPLPLLPSFEQFKRITTPITNFFRSSSPAGVHPHAHD 1895
Query: 231 HNNAGNAYFSSLHKQNLD-YYNH-QNYDTPVYLNTY 332
H + + + + D +H QN PV L+T+
Sbjct: 1896 HTSTTPSSLVGYVRDHQDKSCSHCQNGSQPVVLSTH 1931
>AE014296-1148|AAN12081.1| 2465|Drosophila melanogaster CG32394-PA
protein.
Length = 2465
Score = 30.7 bits (66), Expect = 2.3
Identities = 21/104 (20%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +3
Query: 90 PAASVSYSSISTPINGKTIINPSTEVRRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLH 269
P S S ++P G NPS Y + +P P+++ + + + Y SS+
Sbjct: 1404 PNVSTPDMSGTSPYGGGNSYNPSGSEASKTPAYSSTSPLPIYDQYKQPRSQESDYNSSMS 1463
Query: 270 KQNLDYYN-HQNYDTPVYLNTYQHEPIGFNPHENINVHGPLVHS 398
+ ++ +Q + Y Q + +P+ N + + HS
Sbjct: 1464 PSTPNPHSPYQQPQSSPYTTPQQSQSTHPSPYHNQSPYHQQQHS 1507
>AY071659-1|AAL49281.1| 436|Drosophila melanogaster RE74364p
protein.
Length = 436
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 168 RRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQNY 305
++ ++ ++T HE+F + N NAY Q+ +NHQ +
Sbjct: 96 QKEVDSWQTALSQQQHESFGNQQNHQNAYSEGPVYQHYQGFNHQQH 141
>AF529180-1|AAO84908.1| 2898|Drosophila melanogaster extracellular
matrix protein papilin3 protein.
Length = 2898
Score = 29.1 bits (62), Expect = 7.0
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 330 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 494
YQ +P+GF + + GP+ S + L K+I + + +SIP S + DT +
Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341
>AF529179-1|AAO84907.1| 2776|Drosophila melanogaster extracellular
matrix protein papilin2 protein.
Length = 2776
Score = 29.1 bits (62), Expect = 7.0
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 330 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 494
YQ +P+GF + + GP+ S + L K+I + + +SIP S + DT +
Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341
>AF205357-1|AAG37995.1| 2174|Drosophila melanogaster extracellular
matrix protein papilinprotein.
Length = 2174
Score = 29.1 bits (62), Expect = 7.0
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 330 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 494
YQ +P+GF + + GP+ S + L K+I + + +SIP S + DT +
Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341
>AE014297-4238|AAF56795.3| 2894|Drosophila melanogaster CG33103-PA,
isoform A protein.
Length = 2894
Score = 29.1 bits (62), Expect = 7.0
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 330 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 494
YQ +P+GF + + GP+ S + L K+I + + +SIP S + DT +
Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341
>AE014297-4237|AAF56794.3| 2772|Drosophila melanogaster CG33103-PB,
isoform B protein.
Length = 2772
Score = 29.1 bits (62), Expect = 7.0
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 330 YQHEPIGFNPHENINVHGPLVHS--VSTLAAHKSIPVTFATHSIPYSKTSYLSDTRS 494
YQ +P+GF + + GP+ S + L K+I + + +SIP S + DT +
Sbjct: 286 YQRKPMGFAAPDQLTCSGPISESLFIVMLVQEKNISLDY-EYSIPESLSHSQQDTHT 341
>BT023650-1|AAY85050.1| 97|Drosophila melanogaster IP05304p
protein.
Length = 97
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 603 YPKISGVKSYDIYSPPINTAA--ASYESHPSLKNTLTYSEAPLVSHL 737
YP +SG+ D ++ PI T + +L +TLTY A ++++L
Sbjct: 15 YPNVSGIIILDPFAIPIKTTMEYTLTVHYAALISTLTYKAAKMITNL 61
>AL121806-10|CAB58085.1| 692|Drosophila melanogaster EG:BACR42I17.9
protein.
Length = 692
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 168 RRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQNY 305
++ ++ ++T HE+F + N NAY Q+ +NHQ +
Sbjct: 96 QKEVDSWQTALSQQQHESFGNQQNHQNAYNEGPVYQHYQGFNHQQH 141
>AF541948-1|AAN34650.1| 427|Drosophila melanogaster gag protein
protein.
Length = 427
Score = 28.7 bits (61), Expect = 9.3
Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +3
Query: 258 SSLHKQNLDYYNHQNYDTPVYLNTYQ--HEPIGFNP 359
++ H+Q +YYNH P Y YQ +PI + P
Sbjct: 214 NATHRQTTNYYNHTTPFQPSYNAMYQPIRQPISYIP 249
>AE014298-161|AAF45593.2| 436|Drosophila melanogaster CG11381-PA
protein.
Length = 436
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 168 RRPINFYKTVAPAPVHETFSDHNNAGNAYFSSLHKQNLDYYNHQNY 305
++ ++ ++T HE+F + N NAY Q+ +NHQ +
Sbjct: 96 QKEVDSWQTALSQQQHESFGNQQNHQNAYNEGPVYQHYQGFNHQQH 141
>AE014134-3571|AAF57245.1| 97|Drosophila melanogaster CG10834-PA
protein.
Length = 97
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 603 YPKISGVKSYDIYSPPINTAA--ASYESHPSLKNTLTYSEAPLVSHL 737
YP +SG+ D ++ PI T + +L +TLTY A ++++L
Sbjct: 15 YPNVSGIIILDPFAIPIKTTMEYTLTVHYAALISTLTYKAAKMITNL 61
>AE014134-584|AAF51125.4| 436|Drosophila melanogaster CG33282-PA
protein.
Length = 436
Score = 28.7 bits (61), Expect = 9.3
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 514 FLLKVANLLDYQHIPLILLCRICHQNQVPYI-LRFLVL 624
+L K+ +L D+ +PL+L+ IC+ + I + FLVL
Sbjct: 326 YLAKIYDLSDFNWLPLVLMIIICYVANIGLIGIFFLVL 363
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,907,219
Number of Sequences: 53049
Number of extensions: 710823
Number of successful extensions: 2557
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2556
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -