Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1267
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    28   0.35 
AY752893-1|AAV30067.1|   82|Anopheles gambiae peroxidase 1 protein.    25   3.2  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   3.2  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   5.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   7.4  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 27.9 bits (59), Expect = 0.35
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -1

Query: 253 LKNSKYESRRTTHTYALQNLRYFVLLTKSFEYRYKNVSNF 134
           L  S+  S R THT+ + +L+ F    +   +  KNV  F
Sbjct: 698 LLKSEEISTRITHTFFMDDLKLFAETVQKMHHLLKNVQGF 737


>AY752893-1|AAV30067.1|   82|Anopheles gambiae peroxidase 1 protein.
          Length = 82

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 293 LRISPFSIQIYHTSPLQSHTSLAYHLSR 376
           + ++P+ I + HT  L+SH  LA HL++
Sbjct: 38  VNVNPY-ITLLHTLFLRSHNRLAKHLAQ 64


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 12/50 (24%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
 Frame = -1

Query: 169 SFEY--RYKNVSNFFLKHYNFQTHENHVVYLKITIFSKFCMHIKLNKLIY 26
           SF+Y   + N  N  L+  +    + +  ++ IT+F+ F + ++ ++L+Y
Sbjct: 257 SFQYFSTHPNGRNGILRRSSMSMKDRNF-FINITLFALFTLSLRYDRLLY 305


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
 Frame = +3

Query: 258 SSFTLIPLCGVGSEYPLFPFRSIIRHLCNRTLLSHIIFHA---ALP-SIFSLLY 407
           S++TL+ + G      ++P R  I   C++ L+  +   A   A+P +IFS LY
Sbjct: 224 SAYTLVAISGDRYIAIMWPLRPRITKTCSKCLIGIVWIIALITAVPIAIFSTLY 277


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -1

Query: 208 ALQNLRYFVLLTKSFEYRYKNVSNFFLKHYNFQTHENHVVYLK 80
           A  N+R  V +T +  +  KNV      +YN + H + V+ +K
Sbjct: 29  ATGNVRGIVGVTFTTSHCKKNVDYPLRTNYNLRGHRSDVILVK 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,618
Number of Sequences: 2352
Number of extensions: 15143
Number of successful extensions: 60
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)