Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1266
         (757 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              28   0.36 
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       27   0.62 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    24   5.8  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = -1

Query: 418 NSKINRTIVLRFSLCLGCPARGRRTRCCLDAILCIPRAGGDRITSNRT 275
           N++  R+ V R ++C+ C   G +   C++ I C  +  G  +  +RT
Sbjct: 560 NARDCRSPVDRQNVCIRCGQEGHKAGTCMEEIRC-GKCDGPHVIGDRT 606


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
 Frame = +1

Query: 565 TQSTSEEEPILCPKTAIEISEGST--VHQSPQLS---DDAVLEGDEVNRQVASVEGMKTE 729
           T +TS EEP L P+T + +   ST  + + P  +    DA+   D    Q +S   +KT 
Sbjct: 509 TTTTSTEEPALEPETIMAVEPESTTLMEELPTTTVPITDAITPDDTELLQASSNTNLKTV 568

Query: 730 CKRE 741
            + E
Sbjct: 569 LRAE 572


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = -1

Query: 403 RTIVLRFSLCLGCPARGRRTRCCLDAILCIPRAGGDRI 290
           R+   R +LC+ C   G + R C +   C    G   I
Sbjct: 522 RSTADRQNLCIRCGLTGHKARSCQNEAKCALCGGAHHI 559


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 803,903
Number of Sequences: 2352
Number of extensions: 17176
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)