Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1265
         (805 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1B440 Cluster: Glycosyl transferase, group 1; n=2; Pro...    34   4.8  
UniRef50_Q1Q300 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_Q9MJ65 Cluster: ORF17; n=1; Physarum polycephalum|Rep: ...    33   6.4  
UniRef50_Q8IB68 Cluster: Putative uncharacterized protein MAL8P1...    33   6.4  
UniRef50_Q6KHU2 Cluster: Unspecified toxin/drug ABC transporter ...    33   8.4  

>UniRef50_A1B440 Cluster: Glycosyl transferase, group 1; n=2;
           Proteobacteria|Rep: Glycosyl transferase, group 1 -
           Paracoccus denitrificans (strain Pd 1222)
          Length = 437

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +1

Query: 514 LEKIRRENQWIHAGYLSCLDAKNRSLLAKRLGG 612
           L++I R+  W H    SC D+ N ++ A+RLGG
Sbjct: 134 LKRIARQQGWGHVHVHSCADSANIAMFAERLGG 166


>UniRef50_Q1Q300 Cluster: Putative uncharacterized protein; n=1;
           Candidatus Kuenenia stuttgartiensis|Rep: Putative
           uncharacterized protein - Candidatus Kuenenia
           stuttgartiensis
          Length = 497

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
 Frame = +2

Query: 20  SVILYLNTN-LAYNNHCVSTSDGLVAAVTLLYEPSLNDVYIPLKF-INTHKKKHRITRH 190
           S+++  NT+ +  +N C+ TS+    A ++  +P  ND+Y+  KF  N  +K+  ++ H
Sbjct: 219 SLLIEPNTSFVTIHNECIYTSEEKQHAYSIYRKPGTNDIYVKGKFWTNASQKREWVSVH 277


>UniRef50_Q9MJ65 Cluster: ORF17; n=1; Physarum polycephalum|Rep:
           ORF17 - Physarum polycephalum (Slime mold)
          Length = 125

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
 Frame = +1

Query: 478 FAESTTGLESRPLEKIRRENQWIHAGYLSCLDAKNRSLLAKR-----LGGRIPI--LVFC 636
           FA     L   PL +I  EN++  +G+LSCL     SL+ KR     L G + I  + FC
Sbjct: 54  FASEGNTLALLPLTRIYTENRYFFSGFLSCLAFLISSLIIKRPSTFILKGGLDISNIKFC 113

Query: 637 III 645
           I++
Sbjct: 114 IMV 116


>UniRef50_Q8IB68 Cluster: Putative uncharacterized protein
           MAL8P1.38; n=5; Plasmodium|Rep: Putative uncharacterized
           protein MAL8P1.38 - Plasmodium falciparum (isolate 3D7)
          Length = 590

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 12/55 (21%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = -2

Query: 309 LWRIISAYIFLYLF*SVSFYCTYLMLLIYKKI*RSIHNHIWR----VILCFFLCV 157
           ++  I  YI++Y+   ++ Y TY+++ ++  I  ++  + W     V + F++C+
Sbjct: 1   MYTYIYIYIYIYILIKITIYITYIIIFLFDPINNTLLFYFWENKKDVYIFFYICI 55


>UniRef50_Q6KHU2 Cluster: Unspecified toxin/drug ABC transporter
           ATP-binding and permease protein; n=1; Mycoplasma
           mobile|Rep: Unspecified toxin/drug ABC transporter
           ATP-binding and permease protein - Mycoplasma mobile
          Length = 677

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
 Frame = -2

Query: 306 WRIISAYIFLYLF*SVSFYCTYLMLLIYKKI*RSI-HNHIWRVILCFFLCVFMN 148
           W I+ + IF+ +F   SF  T+L+ +I+++I  S   N +W++I+ FF   F+N
Sbjct: 163 WNILLS-IFMLIF---SFCFTFLLKIIFEEIFPSKDENLLWQIIILFFWISFLN 212


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 756,392,181
Number of Sequences: 1657284
Number of extensions: 14343364
Number of successful extensions: 28488
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28473
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)