Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1263
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   3.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   3.2  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   3.2  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   3.2  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   3.2  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   5.7  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 174 SGKVRRQERSARVRLRENQLVDRRE 248
           +G V++  RSA + L ++ LVD R+
Sbjct: 312 AGPVQQPSRSASIDLMQSALVDERD 336


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 174 SGKVRRQERSARVRLRENQLVDRRE 248
           +G V++  RSA + L ++ LVD R+
Sbjct: 312 AGPVQQPSRSASIDLMQSALVDERD 336


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 174 SGKVRRQERSARVRLRENQLVDRRE 248
           +G V++  RSA + L ++ LVD R+
Sbjct: 264 AGPVQQPSRSASIDLMQSALVDERD 288


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 389  PSSCSLGPMTCPTTPASEPRPPLDGASMP 303
            P + SL P+T P+ P +  RPP+   S P
Sbjct: 1361 PGARSL-PLTPPSVPYASDRPPVATFSCP 1388


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -3

Query: 389  PSSCSLGPMTCPTTPASEPRPPLDGASMP 303
            P + SL P+T P+ P +  RPP+   S P
Sbjct: 1358 PGARSL-PLTPPSVPYASDRPPVATFSCP 1385


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 168 HHSGKVRRQERSARVRLRENQLVDRRE 248
           H S + ++  RSA + L ++ LVD R+
Sbjct: 270 HPSSQHQQPSRSASIDLMQSALVDERD 296


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.135    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,508
Number of Sequences: 2352
Number of extensions: 4178
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)