Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1263
         (598 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB028999-1|BAA83028.1|  804|Homo sapiens KIAA1076 protein protein.     31   3.1  
AE006465-4|AAK61258.1|  402|Homo sapiens unknown protein.              30   5.4  
AK128029-1|BAC87236.1|  167|Homo sapiens protein ( Homo sapiens ...    29   9.5  
AK125914-1|BAC86343.1|  167|Homo sapiens protein ( Homo sapiens ...    29   9.5  
AK098275-1|BAC05274.1|  141|Homo sapiens protein ( Homo sapiens ...    29   9.5  

>AB028999-1|BAA83028.1|  804|Homo sapiens KIAA1076 protein protein.
          Length = 804

 Score = 31.1 bits (67), Expect = 3.1
 Identities = 24/79 (30%), Positives = 31/79 (39%)
 Frame = -3

Query: 413 PDTAWILGPSSCSLGPMTCPTTPASEPRPPLDGASMPYCLLSSMFCRSRFATNLVFASIN 234
           P T  + G  + S    T P TP  E  PPL G S    L S     S F+      S++
Sbjct: 199 PHTPGLCGSLAKSQSTETVPATPGGE--PPLSGGSSGLSLSSPQVPGSPFSYPAPSPSLS 256

Query: 233 ELIFPKTNPSTAFLTPNFA 177
               P+T       TP F+
Sbjct: 257 SGGLPRTPGRDFSFTPTFS 275


>AE006465-4|AAK61258.1|  402|Homo sapiens unknown protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = -3

Query: 401 WILGPSSCSLGPMTCPTTP---ASEPRPPLDGASMPYC 297
           W++ P   +  P T  T P    + P PP  GA +P C
Sbjct: 331 WLVEPGEAAQDPATRRTAPPRRTASPEPPAPGAPLPAC 368


>AK128029-1|BAC87236.1|  167|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46148 fis, clone TESTI4000600. ).
          Length = 167

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 479 PSSRWSRRCPALPRAEEEAVPYRLSIPPKRMTRDP 583
           P+  W   C AL      A P RL +PP+R +  P
Sbjct: 49  PTPAWPASCEALMGPSSSAGPARLRLPPRRHSSLP 83


>AK125914-1|BAC86343.1|  167|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43926 fis, clone TESTI4012556. ).
          Length = 167

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 479 PSSRWSRRCPALPRAEEEAVPYRLSIPPKRMTRDP 583
           P+  W   C AL      A P RL +PP+R +  P
Sbjct: 49  PTPAWPASCEALMGPSSSAGPARLRLPPRRHSSLP 83


>AK098275-1|BAC05274.1|  141|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40956 fis, clone UTERU2011410. ).
          Length = 141

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 479 PSSRWSRRCPALPRAEEEAVPYRLSIPPKRMTRDP 583
           P+  W   C AL      A P RL +PP+R +  P
Sbjct: 23  PTPAWPASCEALMGPSSSAGPARLRLPPRRHSSLP 57


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.135    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,612,833
Number of Sequences: 237096
Number of extensions: 621437
Number of successful extensions: 3464
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3454
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)