Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1260
         (546 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    26   0.93 
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    26   0.93 
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    26   0.93 
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    23   6.6  
AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    23   6.6  

>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +2

Query: 50  LELISKAAI---AKPLPPQEKWGSGGKDLFAGLVP 145
           ++L +K A+    KP P   KWG GG  +  G +P
Sbjct: 57  VQLGAKVAVLDFVKPSPRGTKWGLGGTCVNVGCIP 91


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +2

Query: 50  LELISKAAI---AKPLPPQEKWGSGGKDLFAGLVP 145
           ++L +K A+    KP P   KWG GG  +  G +P
Sbjct: 33  VQLGAKVAVLDFVKPSPRGTKWGLGGTCVNVGCIP 67


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +2

Query: 50  LELISKAAI---AKPLPPQEKWGSGGKDLFAGLVP 145
           ++L +K A+    KP P   KWG GG  +  G +P
Sbjct: 30  VQLGAKVAVLDFVKPSPRGTKWGLGGTCVNVGCIP 64


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 372 ASWPSCRTCCRGTR 413
           A+WP   T CRG R
Sbjct: 127 AAWPIHATACRGVR 140


>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +3

Query: 339 CGTRAACTSCSASWPSCRTCCR 404
           CG    CTS   S   C T C+
Sbjct: 6   CGNDCKCTSGCGSGQPCATDCK 27


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,914
Number of Sequences: 2352
Number of extensions: 3785
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)