SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1256
         (686 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553...   254   5e-68
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803...   252   2e-67
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065...   246   1e-65
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629...   240   8e-64
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448...   234   6e-62
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760...   217   5e-57
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007...   157   1e-38
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593...   120   1e-27
12_01_0915 - 8908643-8908756,8909086-8909203,8909570-8909682,891...    32   0.49 
08_02_1528 + 27666356-27667081                                         29   4.6  
03_01_0522 - 3919120-3919696,3919835-3919919,3919955-3919985,392...    29   4.6  
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430...    29   4.6  
09_02_0513 - 10105746-10106438,10106523-10107040,10107156-101076...    28   6.0  
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034     28   6.0  
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708...    28   6.0  
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140...    28   6.0  
11_06_0284 + 21909758-21913645                                         28   8.0  
06_03_1237 + 28602250-28604196                                         28   8.0  

>02_04_0360 +
           22353057-22353691,22354716-22355144,22355233-22355311,
           22355472-22355594,22356256-22356372,22356636-22356833
          Length = 526

 Score =  254 bits (622), Expect = 5e-68
 Identities = 127/204 (62%), Positives = 156/204 (76%), Gaps = 4/204 (1%)
 Frame = +3

Query: 87  SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 260
           S    + +EE V  AKLAEQAERY++M   M++V +T    EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279

Query: 261 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 434
           ARR+SWR+ISSIEQK E  G+E +  + KEYR K+E EL +IC  +L LLD HL+P ++ 
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339

Query: 435 PESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEISKAKMQPTHPIRLGLA 614
           PESKVFYLKMKGDYYRYLAE  TG  R    +++  AY+ A +I+ A++ PTHPIRLGLA
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 399

Query: 615 LNFSVFYYEILNSPDKACQLAKQA 686
           LNFSVFYYEILNSPD+AC LAKQA
Sbjct: 400 LNFSVFYYEILNSPDRACNLAKQA 423


>04_04_0141 +
           23079516-23079925,23080006-23080084,23080204-23080326,
           23081655-23081771,23081886-23081945
          Length = 262

 Score =  252 bits (617), Expect = 2e-67
 Identities = 125/204 (61%), Positives = 157/204 (76%), Gaps = 4/204 (1%)
 Frame = +3

Query: 87  SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 260
           S+   + +EE V  AKLAEQAERY++M   M++V +T    EL+ EERNLLSVAYKNV+G
Sbjct: 2   SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61

Query: 261 ARRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASN 434
           ARR+SWR+ISSIEQK E  G+E +  + K+YR K+E EL +IC  +L LL+ HL+P ++ 
Sbjct: 62  ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121

Query: 435 PESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEISKAKMQPTHPIRLGLA 614
           PESKVFYLKMKGDYYRYLAE  TG  R    +++  AY+ A +I+ A++ PTHPIRLGLA
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 181

Query: 615 LNFSVFYYEILNSPDKACQLAKQA 686
           LNFSVFYYEILNSPD+AC LAKQA
Sbjct: 182 LNFSVFYYEILNSPDRACNLAKQA 205


>08_02_0753 -
           20805672-20805731,20805825-20805941,20806394-20806516,
           20806700-20806778,20806867-20807258
          Length = 256

 Score =  246 bits (603), Expect = 1e-65
 Identities = 124/199 (62%), Positives = 151/199 (75%), Gaps = 4/199 (2%)
 Frame = +3

Query: 102 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 275
           + +EE V  AKLAEQAERY++M   M++V +T    EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1   MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60

Query: 276 WRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKV 449
           WR++SSIEQK EG  +E    + KEYR K+E EL +IC  +L LLD HL+P ++  ESKV
Sbjct: 61  WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120

Query: 450 FYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSV 629
           FYLKMKGDY+RYLAE  TG  R    + +  AY+ A +I+ A + PTHPIRLGLALNFSV
Sbjct: 121 FYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSV 180

Query: 630 FYYEILNSPDKACQLAKQA 686
           FYYEILNSPDKAC LAKQA
Sbjct: 181 FYYEILNSPDKACNLAKQA 199


>03_05_0881 +
           28461857-28462263,28462357-28462435,28462798-28462920,
           28463632-28463748,28463861-28463917
          Length = 260

 Score =  240 bits (587), Expect = 8e-64
 Identities = 123/203 (60%), Positives = 150/203 (73%), Gaps = 4/203 (1%)
 Frame = +3

Query: 90  STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 263
           S     +EE V  AKLAEQAERY++M   M++V +T    EL+ EERNLLSVAYKNV+GA
Sbjct: 2   SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61

Query: 264 RRSSWRVISSIEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNP 437
           RR+SWR+ISSIEQK E  G+E      KEYR ++E EL +IC  +L LLD HL+P A+  
Sbjct: 62  RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121

Query: 438 ESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEISKAKMQPTHPIRLGLAL 617
           ESKVFYLKMKGDY+RYLAE  +G  R    +++  AY+ A +I+ A +  THPIRLGLAL
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLAL 181

Query: 618 NFSVFYYEILNSPDKACQLAKQA 686
           NFSVFYYEILNSPD+AC LAKQA
Sbjct: 182 NFSVFYYEILNSPDRACNLAKQA 204


>08_02_1026 +
           23743186-23743686,23743793-23743915,23744734-23744850,
           23744948-23745001
          Length = 264

 Score =  234 bits (572), Expect = 6e-62
 Identities = 119/200 (59%), Positives = 146/200 (73%), Gaps = 7/200 (3%)
 Frame = +3

Query: 108 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 272
           +EE+V  AKLAEQAERY++M   M++V        G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10  REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69

Query: 273 SWRVISSIEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESK 446
           SWR++SSIEQK EG  +      A+ YR +VE EL  IC  +L LLD+ L+P A+  ++K
Sbjct: 70  SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129

Query: 447 VFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEISKAKMQPTHPIRLGLALNFS 626
           VFYLKMKGDY+RYLAE  TG  R      +  AYQ A +I+  ++ PTHPIRLGLALNFS
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFS 189

Query: 627 VFYYEILNSPDKACQLAKQA 686
           VFYYEILNSPD+AC LAKQA
Sbjct: 190 VFYYEILNSPDRACTLAKQA 209


>11_06_0036 +
           19474848-19475188,19475696-19475774,19475880-19476002,
           19476970-19477086,19477169-19477228
          Length = 239

 Score =  217 bits (531), Expect = 5e-57
 Identities = 106/165 (64%), Positives = 124/165 (75%), Gaps = 2/165 (1%)
 Frame = +3

Query: 198 GVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMA--KEYRVKVEKEL 371
           G EL+ EERNLLSVAYKNV+GARR+SWR+ISSIEQK EG       A  + YR K+E EL
Sbjct: 18  GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77

Query: 372 REICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQ 551
             IC  +L LLD HL+P A   ESKVFYLKMKGDY+RYLAE  +G+ R    + +  AY+
Sbjct: 78  ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYK 137

Query: 552 DAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQA 686
            A +I+ A + PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQA
Sbjct: 138 AAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQA 182


>11_06_0360 -
           22699524-22699529,22699865-22699899,22700650-22700792,
           22701165-22701220,22701367-22701454,22702737-22703037,
           22704365-22704428
          Length = 230

 Score =  157 bits (380), Expect = 1e-38
 Identities = 85/194 (43%), Positives = 122/194 (62%)
 Frame = +3

Query: 105 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 284
           ++E++V+ AKLAEQAERYDDM   MK +    V++S EER L SV +K  +GARR+SWR+
Sbjct: 3   EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62

Query: 285 ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKM 464
           + S+EQK    ++       Y+ KVE ELR +C +VL ++  H +P A++ E+ VF+ KM
Sbjct: 63  LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122

Query: 465 KGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEI 644
           KGDYYRYLAE +TG  + +    S  AYQ A+  ++                FS+   EI
Sbjct: 123 KGDYYRYLAEFSTGTEKKAATDQSLMAYQ-AWPCAQL---------------FSLL--EI 164

Query: 645 LNSPDKACQLAKQA 686
           +NSP++A Q+AKQA
Sbjct: 165 MNSPERASQVAKQA 178


>01_01_0767 +
           5931031-5931281,5931414-5931594,5932020-5932129,
           5932212-5932360,5932686-5932738,5933168-5933260
          Length = 278

 Score =  120 bits (288), Expect = 1e-27
 Identities = 76/191 (39%), Positives = 105/191 (54%), Gaps = 17/191 (8%)
 Frame = +3

Query: 165 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQK--TEGSERKQQMA 338
           M  AM  V +    L+ EERNLLSV YKN++GA+R++ R+I SIE K  T+G E   +  
Sbjct: 1   MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60

Query: 339 KEYRVKVEKELREICYDVLGLLDK-----HLIPKASNPESKVFYLKMKGDYYR------- 482
            EYR KVE E+ +IC DV+ ++DK       + +      K+   ++  + Y        
Sbjct: 61  AEYRRKVEAEMDKICCDVINIIDKKGDYYRYLAEFKTGTEKIEVSELSLNAYEACDPFFI 120

Query: 483 ---YLAEVATGETRHSVVQDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 653
              +L    T     ++ Q        A + ++  + PT PIRLGLALN SVFY EI+NS
Sbjct: 121 FNLFLFSQVTCFIEFTIYQ--VLVVYTASKTAQTDLTPTDPIRLGLALNISVFYCEIMNS 178

Query: 654 PDKACQLAKQA 686
           PDKACQLAK A
Sbjct: 179 PDKACQLAKNA 189


>12_01_0915 -
           8908643-8908756,8909086-8909203,8909570-8909682,
           8911138-8911218,8911307-8911357,8912173-8912232,
           8913353-8913419,8913509-8913759
          Length = 284

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 3/115 (2%)
 Frame = +3

Query: 348 RVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVV 527
           RVK +  + EI      L  KH   K  +PES+  ++K+   Y     E   G+  +++ 
Sbjct: 63  RVKQDANVSEIKKAYYKLSLKHHPDKNPDPESRKLFVKIANAYEILKDESTRGQYDYAIA 122

Query: 528 QDSQKAYQDAFEISKAKMQPTHP--IRLGLALNFSVF-YYEILNSPDKACQLAKQ 683
              +  Y  A          T P  + +GL L  S F Y        KA +  KQ
Sbjct: 123 HPEEVFYNTAQYYRAYYGHKTDPRAVLIGLLLIISAFQYLNQFGRYSKAIETVKQ 177


>08_02_1528 + 27666356-27667081
          Length = 241

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
 Frame = +3

Query: 93  TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRS 272
           T  V K+      K A   +    +   + E  E  + +     +LLS   K +  +  S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186

Query: 273 SWRVISSIEQKTE-GSERKQQMAKEYRV 353
            W ++S   QKT    + +Q  A E+ +
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAI 214


>03_01_0522 -
           3919120-3919696,3919835-3919919,3919955-3919985,
           3920078-3920158,3920271-3920338,3920645-3920698,
           3921023-3922379
          Length = 750

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 568 LISKASWYAFCESCTT 521
           ++S  SW AFCESC T
Sbjct: 500 MVSCTSWLAFCESCQT 515


>01_05_0487 +
           22641133-22642182,22642276-22642863,22642961-22643068,
           22643582-22643692,22643784-22643849,22644858-22644917,
           22644990-22645119,22645159-22645547,22645783-22645902,
           22645957-22646022,22646190-22646255
          Length = 917

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
 Frame = +3

Query: 84  PSSTMSVDKEEL-VQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVG 260
           P   +  D E++ ++  K AE  ER +      KE     ++ SNEE   L   +KN   
Sbjct: 327 PHYRVEEDGEKIKLEEIKGAESVERINFEERITKEEKNEAMKSSNEEVVSLVTGWKN--- 383

Query: 261 ARRSSWRV-ISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLD 407
            R   W V +   ++ T     K+  AK  + +   +LR     +LG +D
Sbjct: 384 -RIEEWDVDVDENDKDTRKLTPKRDPAKVDKAEKYTDLRSPICCILGHVD 432


>09_02_0513 -
           10105746-10106438,10106523-10107040,10107156-10107695,
           10107791-10108103
          Length = 687

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +3

Query: 72  ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVA 242
           I S+PS+    DKE L     +A +    D +   +KE  ++   + NE RN+L +A
Sbjct: 325 IQSMPSAMYIPDKEGLTP-LHVAAKMGHLDVIQDMLKECPDSAELVDNEGRNILHLA 380


>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
          Length = 930

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = +3

Query: 366 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 470
           +LRE+ YD+   LD+ L+  A+ P S     K+   K+KG
Sbjct: 71  DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110


>07_03_1647 +
           28370226-28370369,28370452-28370611,28370704-28370831,
           28372512-28372628,28372729-28372782,28372985-28373075,
           28373517-28373688,28374452-28374573,28374726-28374817,
           28375331-28375373,28375596-28375656,28376367-28376515,
           28376659-28376729,28376805-28376975,28377056-28377124,
           28377427-28377528,28377629-28377697,28378060-28378138,
           28378238-28378337,28378438-28378513,28378715-28378894,
           28379430-28379552,28379634-28379717,28380068-28380252,
           28380339-28380477,28380585-28380644,28380926-28381030,
           28381332-28381445
          Length = 1019

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
 Frame = +3

Query: 213 NEERNLLSVAYKNVVGARRSSW-RVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYD 389
           N +  LLS AY N+       W + ISS+ Q+   S      ++ Y+  + K L +    
Sbjct: 291 NTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAG--SEIYQESLVKALTKHFGA 348

Query: 390 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEV-ATG 506
            L ++D  L+    + +SK      KGD  RY+  V +TG
Sbjct: 349 KLLIIDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTG 388


>02_05_0699 +
           31013176-31013345,31013749-31013872,31013950-31014032,
           31014106-31014217,31014297-31014401,31014809-31014859,
           31015893-31015979,31016325-31016402,31016477-31016530,
           31016608-31016892
          Length = 382

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 6/91 (6%)
 Frame = +3

Query: 102 VDKEELVQRAKLAEQAERYDDMAAAMKEVTET-GVELSN-----EERNLLSVAYKNVVGA 263
           V+ + L +R++L++    Y ++ A   E+T     E+       +ERN +  +Y N    
Sbjct: 250 VEAKILAKRSELSKFESEYREVLAKFTEMTSRYAQEMQTIDELLKERNAIHASYTNNTTL 309

Query: 264 RRSSWRVISSIEQKTEGSERKQQMAKEYRVK 356
           +RSS         K   S+  Q + KE + K
Sbjct: 310 QRSSSSNKGKTSSKESKSDDDQTVKKEKKSK 340


>11_06_0284 + 21909758-21913645
          Length = 1295

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 20/88 (22%), Positives = 41/88 (46%)
 Frame = +3

Query: 114 ELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVISS 293
           +L +  +  E+ + ++     ++E+T+ G E   EE+N          G +    +    
Sbjct: 403 KLKRHMEADEKTKEFNKQIGVVEEITKQGGERKEEEKNEGEEENGEEEG-KEKELKGRKD 461

Query: 294 IEQKTEGSERKQQMAKEYRVKVEKELRE 377
            E+K +G  R+++  +E+  K EKE  E
Sbjct: 462 KEKKEKGG-REERKEEEHHEKQEKEKEE 488


>06_03_1237 + 28602250-28604196
          Length = 648

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 17/72 (23%), Positives = 36/72 (50%)
 Frame = +3

Query: 396 GLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVQDSQKAYQDAFEISKA 575
           GL+D +      +  SKVFY   + + Y Y + +A G   H    ++   +++   +++A
Sbjct: 314 GLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAIALFKEM--VNRA 370

Query: 576 KMQPTHPIRLGL 611
            ++P H   +G+
Sbjct: 371 NVEPNHVTFIGV 382


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,899,807
Number of Sequences: 37544
Number of extensions: 387254
Number of successful extensions: 1173
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1161
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -