Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1255
(798 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 412 e-116
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21... 389 e-109
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 312 5e-86
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 223 2e-59
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 223 2e-59
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 208 7e-55
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 205 7e-54
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 204 9e-54
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 199 3e-52
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 146 4e-36
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 30 0.33
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 30 0.44
SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit Rev3|Sch... 29 0.77
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 29 0.77
SPAC19A8.08 |upf2||nonsense-mediated decay protein Upf2|Schizosa... 27 2.4
SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 26 5.4
SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 5.4
SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|... 26 5.4
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 26 7.2
SPAC3A11.02 |cps3|mug188|zinc finger protein Cps3|Schizosaccharo... 25 9.5
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 412 bits (1015), Expect = e-116
Identities = 180/215 (83%), Positives = 201/215 (93%)
Frame = +1
Query: 154 ELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 333
++++D++I +LL+VRG +PG VQL+E EI+ LC K+REIF+SQPILLELEAPLKICGDI
Sbjct: 5 DVDLDSIIDRLLEVRGSRPGRQVQLSEDEIRFLCNKAREIFISQPILLELEAPLKICGDI 64
Query: 334 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 513
HGQYYDLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLE ICLLLAYKIKYPENFF+LRGNH
Sbjct: 65 HGQYYDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLEVICLLLAYKIKYPENFFILRGNH 124
Query: 514 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 693
ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP+AAI+DEKIF HGGLSPDL +M+Q
Sbjct: 125 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIIDEKIFTMHGGLSPDLNSMDQ 184
Query: 694 IRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGEND 798
I+RIMRPTDVPD GLLCDLLWSDPDKD GWG+ND
Sbjct: 185 IQRIMRPTDVPDTGLLCDLLWSDPDKDLTGWGDND 219
>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
Sds21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 389 bits (958), Expect = e-109
Identities = 169/215 (78%), Positives = 193/215 (89%)
Frame = +1
Query: 154 ELNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 333
+ +ID +I+KL+K R KP VQL++ EI+ LC SR IFLSQP+LLELEAPLKICGDI
Sbjct: 2 DYDIDAIIEKLVKARNGKPSKQVQLSDAEIRYLCTTSRSIFLSQPMLLELEAPLKICGDI 61
Query: 334 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 513
HGQY DLLRLFEYGG+PP++NYLFLGDYVDRGKQSLE ICLL AYKIKYPENFFLLRGNH
Sbjct: 62 HGQYSDLLRLFEYGGYPPDANYLFLGDYVDRGKQSLEVICLLFAYKIKYPENFFLLRGNH 121
Query: 514 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 693
E ASINRIYGFYDECKRRY+IKLWKTFTDCFNC+PVAA++DEKIFC HGGLSPDL +++Q
Sbjct: 122 EFASINRIYGFYDECKRRYSIKLWKTFTDCFNCMPVAAVIDEKIFCMHGGLSPDLNSLDQ 181
Query: 694 IRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGEND 798
I+RI+RPTD+PD GLLCDL+WSDP+KD GWGEND
Sbjct: 182 IQRIIRPTDIPDTGLLCDLVWSDPEKDLTGWGEND 216
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 312 bits (765), Expect = 5e-86
Identities = 143/215 (66%), Positives = 165/215 (76%), Gaps = 1/215 (0%)
Frame = +1
Query: 157 LNIDNVIKKLLKVR-GEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDI 333
LN+D +I++L+ V K +V L EI +C+ REIFLSQP LLEL P+KI GD+
Sbjct: 190 LNVDEMIQRLIHVGYSRKSSKSVCLKNAEITSICMAVREIFLSQPTLLELTPPVKIVGDV 249
Query: 334 HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 513
HGQY DL+RLFE GFPP SNYLFLGDYVDRGKQSLETI LL YKI+YPENFFLLRGNH
Sbjct: 250 HGQYSDLIRLFEMCGFPPSSNYLFLGDYVDRGKQSLETILLLFLYKIRYPENFFLLRGNH 309
Query: 514 ECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 693
ECA+I R+YGFYDECKRR NIK+WKTF + FNCLP+A++V KIFC HGGLSP L M+
Sbjct: 310 ECANITRVYGFYDECKRRCNIKIWKTFINTFNCLPIASVVAGKIFCVHGGLSPSLSHMDD 369
Query: 694 IRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGEND 798
IR I RPTDVPD GLL DLLWSDP W +N+
Sbjct: 370 IREIPRPTDVPDYGLLNDLLWSDPADTENDWEDNE 404
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 223 bits (546), Expect = 2e-59
Identities = 92/189 (48%), Positives = 137/189 (72%), Gaps = 1/189 (0%)
Frame = +1
Query: 226 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 405
L+E +++ LC K+RE+ + + + P+ +CGDIHGQ++DL+ LF+ GG P+ NYLF
Sbjct: 36 LSEADVEMLCDKAREVLCQENNVQPVRNPVTVCGDIHGQFHDLMELFKIGGDVPDMNYLF 95
Query: 406 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 582
+GDYVDRG S+ET+ LL+A K++YP +LRGNHE I ++YGFYDEC R+Y + +
Sbjct: 96 MGDYVDRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANV 155
Query: 583 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSD 762
WK FT+ F+ P+ A+++++IFC HGGLSP + +++ +R + R +VP +G +CDLLWSD
Sbjct: 156 WKHFTNLFDYFPLTALIEDRIFCLHGGLSPSIDSLDHVRTLDRVQEVPHEGPMCDLLWSD 215
Query: 763 PDKDTAGWG 789
PD D GWG
Sbjct: 216 PD-DRCGWG 223
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 223 bits (546), Expect = 2e-59
Identities = 92/189 (48%), Positives = 137/189 (72%), Gaps = 1/189 (0%)
Frame = +1
Query: 226 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 405
L+E ++ +C ++E+ + + + P+ +CGDIHGQ++DL+ LF GG P++NYLF
Sbjct: 23 LSEEDVIQMCDLAKEVLSVESNVQSVRCPVTVCGDIHGQFHDLMELFNIGGPSPDTNYLF 82
Query: 406 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 582
+GDYVDRG S+ET+ LL+A+KI+YP+ +LRGNHE I ++YGFYDEC R+Y N +
Sbjct: 83 MGDYVDRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANV 142
Query: 583 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSD 762
W+ FTD F+ LP+ A+++++IFC HGGLSP + ++ +R + R +VP +G +CDLLWSD
Sbjct: 143 WQYFTDLFDYLPLTALIEDRIFCLHGGLSPSIDTLDHVRILDRVQEVPHEGPICDLLWSD 202
Query: 763 PDKDTAGWG 789
PD D GWG
Sbjct: 203 PD-DRPGWG 210
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 208 bits (508), Expect = 7e-55
Identities = 92/189 (48%), Positives = 129/189 (68%), Gaps = 1/189 (0%)
Frame = +1
Query: 226 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 405
+ E + LC + R+I + + + + +P+ ICGDIHGQ +DLL LF GG P + YLF
Sbjct: 19 IPESNVVELCQRVRDILIEESNIQWISSPVTICGDIHGQLHDLLELFRIGGSCPGTKYLF 78
Query: 406 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 582
LGD+VDRG S+ET LLL K KYP+ L+RGNHE I ++YGFYDEC R+Y + +
Sbjct: 79 LGDFVDRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANV 138
Query: 583 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSD 762
W+ + F+ L + A+VD K+FC HGGLSP + +++QIR + R +VP +G +CDLLWSD
Sbjct: 139 WRYCCEIFDYLSLGALVDGKVFCVHGGLSPSISSIDQIRLLDRKQEVPHEGAMCDLLWSD 198
Query: 763 PDKDTAGWG 789
P+ D +GWG
Sbjct: 199 PE-DISGWG 206
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 205 bits (500), Expect = 7e-54
Identities = 93/184 (50%), Positives = 127/184 (69%)
Frame = +1
Query: 223 QLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 402
+L+E + + K+ EI S+ L+E++AP+ +CGDIHGQYYDL++LFE GG P + YL
Sbjct: 84 RLSEEQTLYIIKKATEILKSEDNLIEVDAPVTVCGDIHGQYYDLMKLFEVGGNPANTQYL 143
Query: 403 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKL 582
FLGDYVDRG S+E + L A KI YP+ +LLRGNHECA + + F EC +YNIK+
Sbjct: 144 FLGDYVDRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKYNIKV 203
Query: 583 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSD 762
++ FN LP+AAI++++ C HGGLSP+L + IR I R + P GL+CDLLWSD
Sbjct: 204 YEACLQSFNALPLAAIMNKQFLCVHGGLSPELHTLNDIRMINRFCEPPTHGLMCDLLWSD 263
Query: 763 PDKD 774
P +D
Sbjct: 264 PLED 267
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 204 bits (499), Expect = 9e-54
Identities = 88/188 (46%), Positives = 125/188 (66%), Gaps = 1/188 (0%)
Frame = +1
Query: 226 LTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLF 405
L E ++K LC + I + + + + P+ +CGDIHGQ+YDLL LF GG P +NY+F
Sbjct: 17 LPEHQLKRLCEMVKVILMEESNIQPVRTPVTVCGDIHGQFYDLLELFRVGGELPSTNYIF 76
Query: 406 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKL 582
+GD+VDRG SLET L + K +YP+ LLRGNHE I ++YGFYDEC+ +Y N +
Sbjct: 77 MGDFVDRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTKYGNANV 136
Query: 583 WKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQIRRIMRPTDVPDQGLLCDLLWSD 762
WK F+ L +AA++D KI C HGGLSP+++ ++QIR + R ++P +G CDL+WSD
Sbjct: 137 WKYCCQVFDFLTLAAVIDNKILCVHGGLSPEVRTLDQIRILARAQEIPHEGSFCDLMWSD 196
Query: 763 PDKDTAGW 786
P+ D W
Sbjct: 197 PE-DIESW 203
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 199 bits (486), Expect = 3e-52
Identities = 93/205 (45%), Positives = 135/205 (65%), Gaps = 1/205 (0%)
Frame = +1
Query: 157 LNIDNVIKKLLKVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQPILLELEAPLKICGDIH 336
+++DN+I++L + + + E I LC ++E+ + + ++ L P+ + GDIH
Sbjct: 2 IDLDNIIERLYEKQ--------LIAESVIAYLCSLAKEVLMQESNVVRLSTPITVVGDIH 53
Query: 337 GQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 516
GQ+ DLL +F GG P +NYLFLGDYVDRG S+ETI LL+ K++YP+ LLRGNHE
Sbjct: 54 GQFDDLLEIFRIGGPCPYTNYLFLGDYVDRGYYSIETITLLICLKLRYPKRITLLRGNHE 113
Query: 517 CASINRIYGFYDECKRRY-NIKLWKTFTDCFNCLPVAAIVDEKIFCCHGGLSPDLQAMEQ 693
I + YGFY EC R+Y N +WK FTD F+ L ++A +D+ IFC HGGLSP +Q ++Q
Sbjct: 114 SRGITQTYGFYSECLRKYGNANVWKYFTDIFDFLTLSATIDDTIFCVHGGLSPSIQHIDQ 173
Query: 694 IRRIMRPTDVPDQGLLCDLLWSDPD 768
I + R + P +G + DL+WSDPD
Sbjct: 174 ILVLDRFREFPHEGPMADLVWSDPD 198
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 146 bits (353), Expect = 4e-36
Identities = 72/175 (41%), Positives = 108/175 (61%), Gaps = 8/175 (4%)
Frame = +1
Query: 265 REIFLSQPILLEL----EAPLKICGDIHGQYYDLLRLFEYGGFP-PESNYLFLGDYVDRG 429
+E+ P L+++ + L ICGD HGQY+DLL +F+ G P P + YLF GD+VDRG
Sbjct: 192 KELLEKTPSLIDIPVKGDETLVICGDTHGQYFDLLNIFKLHGPPSPTNKYLFNGDFVDRG 251
Query: 430 KQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFN 609
S E L AYK+ YP+ F+ RGNHE +N++YGF EC+ +YN + + F++ F+
Sbjct: 252 SWSTEVAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSETFS 311
Query: 610 CLPVAAIVDEKIFCCHGGL-SPDLQAMEQIRRIMR-PTDVPDQ-GLLCDLLWSDP 765
LP+ +++ + HGGL S D ++Q+R I R P Q GL+ ++LW+DP
Sbjct: 312 LLPLGSLISDSYLVVHGGLFSDDNVTLDQLRNIDRFSKKQPGQSGLMMEMLWTDP 366
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 30.3 bits (65), Expect = 0.33
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = -2
Query: 392 DSGGKPPYSNNLKRS*YCPCMSPQIFKGASSSSSIGCDKNISLDFKHSPL-ISISVN*TF 216
DS PP + + P P I ++SSS + NIS + + S + S+S N
Sbjct: 157 DSVNSPPSYGIMASATNQPLSHPTIVPSSNSSSLLNSTNNISHNPQVSLMSASLSKNLVL 216
Query: 215 IPGFSPRTFSNFFITLSMFNSSVSLSAIGY 126
P SP++ S + +S N VS +A Y
Sbjct: 217 DPA-SPKSVSPDLVYVSSDNPPVSTAASAY 245
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 29.9 bits (64), Expect = 0.44
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 112 RTHTIYPMADRDTDELNIDNVIKKLL-KVRGEKPGMNVQLTEIEIKGLCLKSREIFLSQP 288
+THTI + R D I ++ LL +V G K MNV ++ ++ K R++ + P
Sbjct: 140 KTHTI---SGRPDDPGIIFLTMRALLDRVEGLKRTMNVDISVSYLEIYNEKIRDLLVQDP 196
Query: 289 ILLELEAPLKICGD 330
+ +E L IC D
Sbjct: 197 LSMEKPKSLNICED 210
>SPAC688.10 |rev3||DNA polymerase zeta catalytic subunit
Rev3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1480
Score = 29.1 bits (62), Expect = 0.77
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Frame = +1
Query: 598 DCFNCLPVAAIVDEKIFCC-HGGLSPD 675
D ++C+ + A+ ++FCC HGGL+PD
Sbjct: 646 DPYSCVRILAL---ELFCCSHGGLTPD 669
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 29.1 bits (62), Expect = 0.77
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +1
Query: 235 IEIKGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRL------FEYGGFPPESN 396
+++K + ++ +FL+ P + +LE L+ G + L RL EY P +
Sbjct: 122 LQVKASPIDAQYVFLAPPSIEQLEVRLRGRGT-ENESAILQRLERARAEIEYSEKPGNFD 180
Query: 397 YLFLGDYVDRGKQSLETICL 456
L + D V++ + LE ICL
Sbjct: 181 ALIVNDDVEKAYKQLEAICL 200
>SPAC19A8.08 |upf2||nonsense-mediated decay protein
Upf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1049
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 190 LVIFLLRYRCLTHLCLCLPSDILYVYEIWLNRIGKRREMFKIFADYE 50
++ +LL Y+C + +P D+LY +E + IG R K++ YE
Sbjct: 820 MLTYLLAYQCYFLIQPEMPLDMLYEFE---DVIGYVRPSMKVYMHYE 863
>SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +1
Query: 475 KYPENFFLLRGNHECASINRI--YGFYD-ECKRRYNIKLWKTFTDCFNCLP 618
+Y + + LL+ + + I + + F D K Y +K W+ F CLP
Sbjct: 144 EYADKYRLLKNHKNVSGIVKATHFAFADIPEKSEYTLKQWRIFEKAAGCLP 194
>SPAC3H8.09c |nab3||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 738
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 332 MSPQIFKGASSSSSIGCDKNISLD 261
+S Q+FK SS S + CD+ ++D
Sbjct: 567 VSVQVFKDGSSDSEVRCDEYAAVD 590
>SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 405
Score = 26.2 bits (55), Expect = 5.4
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -1
Query: 492 EILGIFNLVGEEQAYCFQGLLATVHIVSKEEIVG 391
EIL I + E C QGL IV KE VG
Sbjct: 258 EILEILDTAEETLRSCIQGLNIDAKIVRKERSVG 291
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 376 GFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKY 480
GF + + L LG Y RGKQS + L ++ Y
Sbjct: 482 GFGEDLDCLILGGYFGRGKQSGKINSFLCGLRMDY 516
>SPAC3A11.02 |cps3|mug188|zinc finger protein
Cps3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -2
Query: 332 MSPQIFKGASSSSSIGCDKNISLDFKHSPLISISVN*TFIPGFSPRTFS 186
+SP F + +I +++SL K P+++ S + + PGFS TF+
Sbjct: 266 ISPASFGSGIRTRNIFNPESMSLGLK-PPILNRSYSASMAPGFSMNTFT 313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,283,702
Number of Sequences: 5004
Number of extensions: 71403
Number of successful extensions: 206
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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