Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1245
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   3.1  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   3.1  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   5.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    23   9.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    23   9.5  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   9.5  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 110 QQASPTPRRSPLKRPDTSYRPF 45
           Q   P P+R+ L+R D+ +RP+
Sbjct: 208 QPIVPQPQRASLERRDSLFRPY 229


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 110 QQASPTPRRSPLKRPDTSYRPF 45
           Q   P P+R+ L+R D+ +RP+
Sbjct: 208 QPIVPQPQRASLERRDSLFRPY 229


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 442 SPHALNSGRRELELHDVIFQEVCHTVYESRLDLC 341
           SP    +G+   E+ D+I  +VC  + E+ L  C
Sbjct: 325 SPFPPVAGKTSTEVLDIIHSDVCGPMEETTLGGC 358


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 635 ASKHTETSYEVVAHPHHEEHYASSG 709
           +S+H + +++   H HH +H    G
Sbjct: 272 SSQHQQPTHQTHHHHHHHQHGGGVG 296


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 635 ASKHTETSYEVVAHPHHEEHYASSG 709
           +S+H + +++   H HH +H    G
Sbjct: 272 SSQHQQPTHQTHHHHHHHQHGGGVG 296


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 635 ASKHTETSYEVVAHPHHEEHYASSG 709
           +S+H + +++   H HH +H    G
Sbjct: 224 SSQHQQPTHQTHHHHHHHQHGGGVG 248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,741
Number of Sequences: 2352
Number of extensions: 10852
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)