Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1242
         (785 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC104668-1|AAI04669.1|   88|Homo sapiens LYR motif containing 2 ...    81   4e-15
BC009782-1|AAH09782.1|   88|Homo sapiens LYR motif containing 2 ...    81   4e-15

>BC104668-1|AAI04669.1|   88|Homo sapiens LYR motif containing 2
           protein.
          Length = 88

 Score = 81.0 bits (191), Expect = 4e-15
 Identities = 40/78 (51%), Positives = 55/78 (70%)
 Frame = +3

Query: 6   LFLLQFLLRQEVLKLYRDIFRTIRLVPDELTRIELKQWAQSDFKNNKHHTDETTIKIMLH 185
           L L QF+ RQ+VL LYR I +TIR VP++  R  LK WA+ +F+ NK  T+E TI++M+ 
Sbjct: 11  LTLKQFVRRQQVLLLYRRILQTIRQVPNDSDRKYLKDWAREEFRRNKSATEEDTIRMMIT 70

Query: 186 YGKKTLKDLQHTLALSKS 239
            G   LK+L+ TLAL+KS
Sbjct: 71  QGNMQLKELEKTLALAKS 88


>BC009782-1|AAH09782.1|   88|Homo sapiens LYR motif containing 2
           protein.
          Length = 88

 Score = 81.0 bits (191), Expect = 4e-15
 Identities = 40/78 (51%), Positives = 55/78 (70%)
 Frame = +3

Query: 6   LFLLQFLLRQEVLKLYRDIFRTIRLVPDELTRIELKQWAQSDFKNNKHHTDETTIKIMLH 185
           L L QF+ RQ+VL LYR I +TIR VP++  R  LK WA+ +F+ NK  T+E TI++M+ 
Sbjct: 11  LTLKQFVRRQQVLLLYRRILQTIRQVPNDSDRKYLKDWAREEFRRNKSATEEDTIRMMIT 70

Query: 186 YGKKTLKDLQHTLALSKS 239
            G   LK+L+ TLAL+KS
Sbjct: 71  QGNMQLKELEKTLALAKS 88


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,651,769
Number of Sequences: 237096
Number of extensions: 1645843
Number of successful extensions: 1785
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1785
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9590293096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)