Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1239
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001760-1|AAN71515.1|  159|Drosophila melanogaster RH06526p pro...   267   9e-72
AY071556-1|AAL49178.1|  159|Drosophila melanogaster RE62581p pro...   267   9e-72
AE014134-3588|AAF57259.1|  159|Drosophila melanogaster CG12775-P...   267   9e-72
AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein.     30   2.7  
AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-P...    30   2.7  
AE014296-2968|AAF49299.1|  885|Drosophila melanogaster CG14586-P...    30   3.5  
U28966-1|AAB52512.1|  419|Drosophila melanogaster septin protein.      29   8.2  
AY061281-1|AAL28829.1|  419|Drosophila melanogaster LD20082p pro...    29   8.2  
AE014297-2823|AAF55783.1|  419|Drosophila melanogaster CG4173-PA...    29   8.2  

>BT001760-1|AAN71515.1|  159|Drosophila melanogaster RH06526p
           protein.
          Length = 159

 Score =  267 bits (655), Expect = 9e-72
 Identities = 116/159 (72%), Positives = 141/159 (88%)
 Frame = +1

Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
           MTNSKGYRRGTRD+F+R FR HG IPLSTYM+V+K+GDIVDI+G+GAVQKG+P+K YHGK
Sbjct: 1   MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGK 60

Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
           TGR++NVT HA+GVIVNKRVRG+I+ KR+N+R+EH+ HSKCR+DFL+RVKENERLLKEAK
Sbjct: 61  TGRIFNVTQHAVGVIVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAK 120

Query: 550 AAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFVA 666
             G+ V+LKRQP  PK AH V   E+P+ LAPIPYEF+A
Sbjct: 121 EKGQWVSLKRQPEQPKKAHFVKKLEEPIALAPIPYEFIA 159


>AY071556-1|AAL49178.1|  159|Drosophila melanogaster RE62581p
           protein.
          Length = 159

 Score =  267 bits (655), Expect = 9e-72
 Identities = 116/159 (72%), Positives = 141/159 (88%)
 Frame = +1

Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
           MTNSKGYRRGTRD+F+R FR HG IPLSTYM+V+K+GDIVDI+G+GAVQKG+P+K YHGK
Sbjct: 1   MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGK 60

Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
           TGR++NVT HA+GVIVNKRVRG+I+ KR+N+R+EH+ HSKCR+DFL+RVKENERLLKEAK
Sbjct: 61  TGRIFNVTQHAVGVIVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAK 120

Query: 550 AAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFVA 666
             G+ V+LKRQP  PK AH V   E+P+ LAPIPYEF+A
Sbjct: 121 EKGQWVSLKRQPEQPKKAHFVKKLEEPIALAPIPYEFIA 159


>AE014134-3588|AAF57259.1|  159|Drosophila melanogaster CG12775-PA
           protein.
          Length = 159

 Score =  267 bits (655), Expect = 9e-72
 Identities = 116/159 (72%), Positives = 141/159 (88%)
 Frame = +1

Query: 190 MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK 369
           MTNSKGYRRGTRD+F+R FR HG IPLSTYM+V+K+GDIVDI+G+GAVQKG+P+K YHGK
Sbjct: 1   MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIKGHGAVQKGLPYKAYHGK 60

Query: 370 TGRVYNVTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKEAK 549
           TGR++NVT HA+GVIVNKRVRG+I+ KR+N+R+EH+ HSKCR+DFL+RVKENERLLKEAK
Sbjct: 61  TGRIFNVTQHAVGVIVNKRVRGKILAKRVNVRIEHIHHSKCREDFLRRVKENERLLKEAK 120

Query: 550 AAGKTVNLKRQPAPPKAAHIVSGTEKPVLLAPIPYEFVA 666
             G+ V+LKRQP  PK AH V   E+P+ LAPIPYEF+A
Sbjct: 121 EKGQWVSLKRQPEQPKKAHFVKKLEEPIALAPIPYEFIA 159


>AY875639-1|AAX59985.1| 1854|Drosophila melanogaster Dp205 protein.
          Length = 1854

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +1

Query: 388 VTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKE 543
           V     G+   +R +  IIP   N ++E  +HS    +   ++ +N RL+ E
Sbjct: 612 VNGQTNGIPTRRRPKSSIIPSSSNGKLEQREHSLVTSESFHQISDNLRLMSE 663


>AE014297-2674|ABI31177.1| 1854|Drosophila melanogaster CG34157-PD,
           isoform D protein.
          Length = 1854

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 14/52 (26%), Positives = 25/52 (48%)
 Frame = +1

Query: 388 VTAHALGVIVNKRVRGRIIPKRINIRVEHVKHSKCRQDFLKRVKENERLLKE 543
           V     G+   +R +  IIP   N ++E  +HS    +   ++ +N RL+ E
Sbjct: 612 VNGQTNGIPTRRRPKSSIIPSSSNGKLEQREHSLVTSESFHQISDNLRLMSE 663


>AE014296-2968|AAF49299.1|  885|Drosophila melanogaster CG14586-PA
           protein.
          Length = 885

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 305 MSPTLYTFMYVESGIVPCVRNLRANKSLVPRR*P 204
           + PT+YT +YVE+   P VR+L   K L  +R P
Sbjct: 710 IEPTVYTRIYVETSEEPDVRDLYRKKVLGSKRSP 743


>U28966-1|AAB52512.1|  419|Drosophila melanogaster septin protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 448 KRINIRVE-HVKHSKCRQDFLKRVKENERLLKEAK--AAGKTVNLKRQPAPPK 597
           KR N   E   K  + RQ F++RVKE E  LKE++     K   LKR  A  K
Sbjct: 328 KRSNHLAELQSKEEEVRQMFVQRVKEKEAELKESEKDLHAKFEKLKRDHAEEK 380


>AY061281-1|AAL28829.1|  419|Drosophila melanogaster LD20082p
           protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 448 KRINIRVE-HVKHSKCRQDFLKRVKENERLLKEAK--AAGKTVNLKRQPAPPK 597
           KR N   E   K  + RQ F++RVKE E  LKE++     K   LKR  A  K
Sbjct: 328 KRSNHLAELQSKEEEVRQMFVQRVKEKEAELKESEKDLHAKFEKLKRDHAEEK 380


>AE014297-2823|AAF55783.1|  419|Drosophila melanogaster CG4173-PA
           protein.
          Length = 419

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +1

Query: 448 KRINIRVE-HVKHSKCRQDFLKRVKENERLLKEAK--AAGKTVNLKRQPAPPK 597
           KR N   E   K  + RQ F++RVKE E  LKE++     K   LKR  A  K
Sbjct: 328 KRSNHLAELQSKEEEVRQMFVQRVKEKEAELKESEKDLHAKFEKLKRDHAEEK 380


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,492,083
Number of Sequences: 53049
Number of extensions: 657319
Number of successful extensions: 2366
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2366
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)